Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1469 |
Symbol | |
ID | 3673582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1553511 |
End bp | 1554215 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637710154 |
Product | short-chain dehydrogenase/reductase |
Protein accession | YP_315227 |
Protein GI | 74317487 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACCCC GCCAGACCGT CCTGATCACC GGCGCGAGCC GGGGCCTCGG GCTCGAATGG GCGCGGCAGT ATGCCGAAGA CGGCTGGGGC GTGTGCGCGA CCTGCCGCCG CCCGGAAGAG GCGCGCGAAC TGACGGCGCT CGCGGCGCAG CATCGCGATG TCAGCGTGCA CCGGCTCGAC GTGACCGATG CCGAGCAACT GCGCACGCTG CAACTCGATC TCGAAGAGGC GTGCATCGAC GTGCTGCTCA ACAACGCGGG CGTCTACCTC GACAAGTTCC TTGGCGACTT CGGCGGCATC GACTACGAAG TCTGGTTGCG CAGCTTCGCC GTCAACACGC TCGGTGCCGT TCGCGTCAGC GAGGCGTTCG CCGCGCAGGT CGCGCGCAGC GAGAAGAAGC TCGTCGTCGT GACCACGAGC CACATGGGAT CGATCACCGA CATCAGCGCG CCGGGCAGCT ACGCCTACCG CTCGAGCAAG GCGGCCTTGA ACGCCGCGAT GAAGGGCATC GCGCCGGCAC TCGAGCCGCG CGGCATCGGC CTCCTGCTGC TGCATCCGGG CTGGGTCAAA ACGCGCATGG GCGGCCGCGA CGCGCCGTAT ACGCCCGAAC AGAGCGTTCG CGGCATGCGC CGTCTGGTCG AGAAATTCGA CCCGTCGATG AACGCGCGTT TCTTCCGTTT CGACGGCAGC GAAATGCCCT GGTAG
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Protein sequence | MRPRQTVLIT GASRGLGLEW ARQYAEDGWG VCATCRRPEE ARELTALAAQ HRDVSVHRLD VTDAEQLRTL QLDLEEACID VLLNNAGVYL DKFLGDFGGI DYEVWLRSFA VNTLGAVRVS EAFAAQVARS EKKLVVVTTS HMGSITDISA PGSYAYRSSK AALNAAMKGI APALEPRGIG LLLLHPGWVK TRMGGRDAPY TPEQSVRGMR RLVEKFDPSM NARFFRFDGS EMPW
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