| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1468 |
|---|
| Symbol | |
|---|
| ID | 3673581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1552329 |
|---|
| End bp | 1553510 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637710153 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_315226 |
|---|
| Protein GI | 74317486 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGA GGCGCGCGGC GGCACCCGAC CCGGATTTCG TACTACCCGA TTACGCCGGC
GGGGGTCTGG TCAACCTCAT GAGTTCGATC ACGACGGCGC TCGCGGATGG CAGCCCCTAC
CCGACACTCA CGGCGCTGCC GCCCGAGACG CTCGCCGCCG CCCGGCACGT GCTGATGCTC
GTGGTCGACG GGCTGGGCAG CGCCTTTCTG GCGCGCCAGG GCGGGCCGCT GCGGCGCTGC
ATGCGCGCCG AGCTCACGTC GGTCTTTCCG TCAACGACGG CGAGCGCGAT TCCGACCTTC
CTGACCGGGC TCGCGCCGCA GCAACACGGA CTGACCGGCT GGCACATGTA CTTCCGCGAG
ATCGGCGCGG TCGTCGCGCC ACTTCCGTTC CGTCTGCGCA CCGGACGCCA GGCGCTGCGC
GATGCGGGCG TCTCGCCGGG TTCGCTGTTC GGACTCACGC CGCTGTTCGC CCGGCTGACG
CGCGCGAGCC ACGTCGTCAG CCCGGAGAAC ATCGTGCATT CCGACTTCAA CGTGGCGCTC
GCGGGGCCGG CGCAGCGCTA CGGCTACGAC AGCCTCGAGG AGATGTTTGC GGTGCTGGCC
GACCTGCTGC GCCGGCCCAC GCCGAGCTAC ATCCACGCCT ACTGGCCGCG GCTCGACAGC
CTCGCGCACG AACACGGCGT CGACAGCGCC GAAGTCGTCG ACGCCTTCAA TGCGCTCAAT
GCGTCGTTCA CGCGCCTGAT CGAGTCCGCG CGCGACTGCG TCATCGTGGT CACCGCCGAC
CACGGCTTCA TCGATTCACC ACCCGGGGAA ACGATCGATC TCGACGATCA CCCCGCGCTG
CGCGCGACGC TGCTCTTGCC GCTATGCGGC GAAGCCCGCG CCGCCTACGC CTACGTGCGC
GCCGGGCGCG AGGCCGAATT CGAGGCCTAT CTCGCGGCGG AACTCGCCGA CCGGGTGCGC
GTGTACCGGA GCGCGTCGCT CGTCCACGAC GGCTGGTTCG GCCCCGGCGA AGCCCATCCC
GCGCTCGGCG ACCGCATCGG CGACTACCTC CTGCTGCCGC GCGGGCGCGC GATCCTGCGC
GACTGGCTGC TCGGCGAAGT GCGCCATGCC CATCTCGGCG TGCACGGCGG CGCGTCGGCG
GCAGAAATGC GGGTCCCGCT CGTGGTTGTG GTGCGCGACT GA
|
|---|
| Protein sequence | MDARRAAAPD PDFVLPDYAG GGLVNLMSSI TTALADGSPY PTLTALPPET LAAARHVLML
VVDGLGSAFL ARQGGPLRRC MRAELTSVFP STTASAIPTF LTGLAPQQHG LTGWHMYFRE
IGAVVAPLPF RLRTGRQALR DAGVSPGSLF GLTPLFARLT RASHVVSPEN IVHSDFNVAL
AGPAQRYGYD SLEEMFAVLA DLLRRPTPSY IHAYWPRLDS LAHEHGVDSA EVVDAFNALN
ASFTRLIESA RDCVIVVTAD HGFIDSPPGE TIDLDDHPAL RATLLLPLCG EARAAYAYVR
AGREAEFEAY LAAELADRVR VYRSASLVHD GWFGPGEAHP ALGDRIGDYL LLPRGRAILR
DWLLGEVRHA HLGVHGGASA AEMRVPLVVV VRD
|
|---|
| |