| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1419 |
|---|
| Symbol | |
|---|
| ID | 3673481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1509746 |
|---|
| End bp | 1510408 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637710104 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_315177 |
|---|
| Protein GI | 74317437 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGG AGACCCGCAT GACCGCCGCC CCCCCGATTC CCGACGCCAC GCGCGCCGAC
GCCCGCCGCA GCCAGATCCG TGCGGCCGCG GCCGAGTGCT TCCGGCAGCA TGGCTTCCAC
GGCACGAGCA TCGCGCAAAT ATCCAAGGCC GCGGGCATGA GCACGGGCCA CATCTACCAC
TATTTCGAGA ACAAGGAAGC GATCATCGCC GAGATCGTTG CCCAGGATCT CGAGCGCTTG
CTGACGCTGA CCGCCGAGCT GCGCGCTGCG AGCGACGTCA AGGCCGCGAT GATCGAGCGC
GCCGTGGAAG GCGTGCAGCA GAATCTCGAT CCGGCTCACG CGGGCCTGCA GCTCGAGGTC
GTCGCCGAAG CCGCACGCAA TCCGCGCATT GCGCACATCG TGCGCGCGGC CGACCGCCAG
TGTCGGGAAA GCCTGCTGCA GACGATTCGA ACGCTGCGAC GGGCCGCCGG GCATCAGGAC
AGCGAGGCGA CGCTCGCGGG CATGGCCGAG GCGATCTCGG CGATGTTCGA AGGCCTGCGC
ATACGCGCGA TCCGCAACCC CGACATCGAC CGCGATGTCG TCGTGCAAAT GTTCCGGCGC
ATGGTCGGCG ACCTGCTCTC CCAGGCGCCG CAACCGCCGC CCCGCGGTCG GCGCGACACA
TAG
|
|---|
| Protein sequence | MNPETRMTAA PPIPDATRAD ARRSQIRAAA AECFRQHGFH GTSIAQISKA AGMSTGHIYH
YFENKEAIIA EIVAQDLERL LTLTAELRAA SDVKAAMIER AVEGVQQNLD PAHAGLQLEV
VAEAARNPRI AHIVRAADRQ CRESLLQTIR TLRRAAGHQD SEATLAGMAE AISAMFEGLR
IRAIRNPDID RDVVVQMFRR MVGDLLSQAP QPPPRGRRDT
|
|---|
| |