| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1418 |
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| Symbol | |
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| ID | 3673480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1508390 |
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| End bp | 1509592 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637710103 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_315176 |
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| Protein GI | 74317436 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACTC GCTGCAATCT GCCTTCCCCC TCGCTGATCG TCGCGCTCGC GGGCAGCCTG
TTTCTTGCCG CGTGCGGCGG CGACAACGAA GCGCAGAAGG GCGGCCCCGG CGCCGGCGGC
CCGGGCGCGC CCGCGGTGAC GGTGCTCACG GTGCAGGCCG AAGCCGTGCC GCTCGCGACC
GAACTGCCCG GGCGCACGAC GCCTTACATG ATCGCGGAGT TGCGGCCGCA GGTGACGGGC
ATCGTCAAGG CGCGGCCATT CAAGGAAGGC AGCGAGGTCA AGGCCGGCCA GGTCTTGTAC
CGCATCGACC CGGCGCCTTA TCAGGCCGCG TACAACAGCG CCGTCGCCAA CCTTGCGCGC
GCCGAGGCCA ACGTTGCCGC GGCGCGGACG AAAGCCGAGC GGTACGCCGA GCTGGTCAAG
ATCGAGGCCG TGAGCAAACA GGCCAACGAC GAGGCCGTCG CGGCGATGAA GCAGGCCCAG
GCCGAAGTCG GCGCCGCGAA GGCGGCGCTC GAAAGCGCGC GCATCGATCT CGGCTTCACT
CGCGTCGCGT CGCCGATTTC GGGACGCATC GGGCGCTCTA CCGTCACGCC CGGCGCGCTC
GTCACGGCGA ACCAGGCGCA GGCGCTGGCG ACAGTCCAGC AGCTCGATCC GATCTATGTC
GACCTCACCC AGTCGAGCGC AGAACTGCTG CGCATGCGTC GCGATTTCGC CTCCGGCAAG
CTCAGGCGCA GCGGCAGCGA CAGCCTGCCG GTCGAACTCG TGCTCGAAGA CGGCAGCGTC
TACGGCGCGA AGGGCAGGCT CGCGTTTTCC GAGGTCGCCG TCGACGAGGC CACCGGCAGC
GTCACGCTGC GCGCGGTCTT TCCCAACCCC GACGGCGAGC TGCTGCCCGG CATGTACGTG
CGCGCGCGGC TCTCGCAGGG CGTGCGCGAG GACGCGATCC TCGTTCCGCA CGCGGCCGTC
ACGCACGACC CGCGCGGCAA CGCGACGGTC ATGCTGGTCA ATCCGAAAGG CATCGCCGAG
GCGCGCGTGG TCAAAGCCGA GCAGTCGATC CAGGACAAAT GGGTCGTGAC GGAAGGGCTC
GCGCCCGGTG AACGCGTCAT CGTCGAGGGA CTGCAAAAGG CCCGGCCGGG TACGCCCGTC
CAGGCCCAGC CGGCGGGTCG AGCAGCGCCC GCCGCGACCA CGCCGCCGGC AACGAAGGGG
TAG
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| Protein sequence | MPTRCNLPSP SLIVALAGSL FLAACGGDNE AQKGGPGAGG PGAPAVTVLT VQAEAVPLAT
ELPGRTTPYM IAELRPQVTG IVKARPFKEG SEVKAGQVLY RIDPAPYQAA YNSAVANLAR
AEANVAAART KAERYAELVK IEAVSKQAND EAVAAMKQAQ AEVGAAKAAL ESARIDLGFT
RVASPISGRI GRSTVTPGAL VTANQAQALA TVQQLDPIYV DLTQSSAELL RMRRDFASGK
LRRSGSDSLP VELVLEDGSV YGAKGRLAFS EVAVDEATGS VTLRAVFPNP DGELLPGMYV
RARLSQGVRE DAILVPHAAV THDPRGNATV MLVNPKGIAE ARVVKAEQSI QDKWVVTEGL
APGERVIVEG LQKARPGTPV QAQPAGRAAP AATTPPATKG
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