Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1413 |
Symbol | |
ID | 3672514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1500258 |
End bp | 1500959 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637710098 |
Product | ABC transporter ATPase |
Protein accession | YP_315171 |
Protein GI | 74317431 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACG CGCTGATCCG GCTTGCCGGC GTCACCAAGA CCTACGGCCA CGGGCCCGCC GCGTTCGAGG CGCTCAAGGG AATCGATCTG ACGATCGACG CCGGGGAGTT CGTCGCGATC ATGGGCCCGA GCGGCTCGGG CAAGTCGACC GTGATGAACA TCCTCGGCTG CCTCGATACG CCGACCGCGG GCAGCTACCT CTTCGAGGGC GTGCACGTCG AGCGTATGAC GCGCAACCAG CGCGCGCTCT TGCGCCGCAA CTACCTCGGC TTCGTCTTCC AGGGCTTCAA TCTGCTCGCG CGCACGACCG CGCTCGAGAA TGTCGAACTG CCGCTGATCT ACCGCGGCGA GCCCGCCGCC CGGCGCCACG CCGCAGCCCG CGCCGCGCTT GCCCAGGTCG GCCTCGAGGG CTGGGAGCAC CATACGCCGG CCGAACTGTC GGGCGGCCAG CAGCAGCGTG TGGCGATCGC GCGCGCGATC GTCACCGCGC CCGAGGTGTT GCTCGCCGAC GAACCCACCG GCAACCTCGA CACGCAGACG AGCAAGGAAA TCATGGACCT GATCAGCGCG CTCAATCGCG ACCAGGCGAT CACGGTATTG ATGGTGACGC ACGAGCCGGA GATGGCAGCG TACGCGCGCC GCGCGATCCG TTTCGTCGAC GGCCGTGTGG CCAGCGACGG CAGCGGGCAC GGGGACGCCT GA
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Protein sequence | MNDALIRLAG VTKTYGHGPA AFEALKGIDL TIDAGEFVAI MGPSGSGKST VMNILGCLDT PTAGSYLFEG VHVERMTRNQ RALLRRNYLG FVFQGFNLLA RTTALENVEL PLIYRGEPAA RRHAAARAAL AQVGLEGWEH HTPAELSGGQ QQRVAIARAI VTAPEVLLAD EPTGNLDTQT SKEIMDLISA LNRDQAITVL MVTHEPEMAA YARRAIRFVD GRVASDGSGH GDA
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