| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1410 |
|---|
| Symbol | |
|---|
| ID | 3672511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1494890 |
|---|
| End bp | 1496695 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637710095 |
|---|
| Product | gamma-glutamyltranspeptidase |
|---|
| Protein accession | YP_315168 |
|---|
| Protein GI | 74317428 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATGA ACCGCTTTTT GCTCTGGCTG CTCCTCAGCC TCGTCGCGTC CCCGCTGCGC
GCCGCGCCTG ACGGGGTCGT CGCCGTTTCC CATCCGGCCG CGGCCGCCGC CGGCGCGCGC
ATGCTCGCCA CGGGCGGCAA CGCCGTCGAC GCCGCCGCGG CGGTGCAGTT CGCGTTGAAC
GTGGTCGAGC CGCAGTCGTC CGGCATCGGC GGCGGCGGCT TCATGCTGAT TCATCTCGCC
AAGACCGGCG AGACCGTCAT CGTCGACTCG CGCGAGCGCG CACCGGCTGC GTCCCGCGCC
GACATGTTCG CGCCCGGCGG CGCGCCGATG GCGTTTCCGC TCGCCTCGAC GAGCGGGCTT
GCGGTCGGCG TGCCGGGTAC CGTGCGCGGC GTCGACACGG CGCTGCGCCG TTGGGGCACG
ATGGCGCTCG CCGACACGCT CGCCCCCGCG ATCGAACTCG CCGCGGGCGG CTTTCGCGTC
AACCGCTTTC TCGCTGCCGA CATCGCCGAC GACGGCGGGC GGACAGCCAT CCATCCGGAA
ACCGCTGCGA TCTTTCGGCC CGGCGGCGTG CCGTTGGCCG AGGGCGACTG GCTGGTGCAG
CCCGATCTTG CGCGCACGCT CAGACTCATT GCGACAGGTG GGCCAAAGGT TTTTTACGAG
GGTCCGCTCG CGCGCGCGAT CGTCGAAGCC CAGCAACGGA CACGCGGCGA GTTGGGCGAG
CCCGGCCGCG GACGCATGGC AATCGCCGAC CTGCGCGACT ACACGGCCGC GATCCGGCGT
CCGCTCACGG GGCAGTACCG CGGCTGGACC GTGGCGAGCA TGCCACCCCC GTCCTCGGGC
GGCCTGACGT TGCTGCAGAC GCTGGGCCTG CTCGAGCGCT TTCCGCTCGG CGATACGACA
CAGGGTTACG GCTTCGGCAG CGCGAAAACG GTGCACCTCA TGATCGAAGC GATGCGCCTC
GCCTTCGCCG ACCGCGCCGT CTGGATCGGC GACGACGACG CACGCGCCCT GCCCCAGGCC
GCGCTGCTGC ATCCGCAGTA CCAGGCCGCA CGCGCCGCGC TCATCGATCC GGCGCGACGC
ATCGAACAGG CAAGCGCCGG CGACCCGACA CGCTGGGCCC CCGCGGCAAC CAAGGCGCCG
CAACGCATCC GTAGCAGGGC GGAAAGTCCG CAGACGACCC ATTTCTCGAT CGTCGACCGC
TGGGGCAACG TCGTGAGCTA TACGAGCACG ATCGAATACA CCTGGGGCGC GGGCATCACC
GTGCCGGGCT ACGGCTTTCT GCTCAACAAC GAACTGACCG ATTTCAATTT CGTGCCGAGC
GCCGACAGCG CGACCGGCAA TCCCGGCGCC AACGACGTCG CGCCCGGCAG ACGTCCGCGA
TCGAGCATGG CACCGACGCT GCTTCTGAAA AACGGGCGTC CGGTCGCGGC CTACGGCTCG
CCGGGCGGCG CGACGATCAT CAACTCGGTG CTCAACATGA CGCTCAATCT CGTCGACCAC
GGCATGACGC CGGGTCAGGC GATCGCCGCG CCGCGCGTCT CGGTCACGAG CGCTGCAGGC
AAAGTCGCCT GCGAGGGCGG CGAGGATTTC ATGCAGCCGC GCCTGAGCAT CGCGGTGCAG
GACCGCCTTC GCGCGCTCGG ACACGTCGGA CTGGGAGAAG CCGGGACGGA CGGCTGTCAG
GGGAGGATCG GTTCGGTGCA GGCGGTCGTC GTCGACCTGA CCAGTGGCGC GCAGTACGGC
GCCGCCGATC CGCGCCGCGA AGGTACGGTG ATCCGGGTAG GTCCCGGCGC GCCCCTCGCG
CCCTGA
|
|---|
| Protein sequence | MPMNRFLLWL LLSLVASPLR AAPDGVVAVS HPAAAAAGAR MLATGGNAVD AAAAVQFALN
VVEPQSSGIG GGGFMLIHLA KTGETVIVDS RERAPAASRA DMFAPGGAPM AFPLASTSGL
AVGVPGTVRG VDTALRRWGT MALADTLAPA IELAAGGFRV NRFLAADIAD DGGRTAIHPE
TAAIFRPGGV PLAEGDWLVQ PDLARTLRLI ATGGPKVFYE GPLARAIVEA QQRTRGELGE
PGRGRMAIAD LRDYTAAIRR PLTGQYRGWT VASMPPPSSG GLTLLQTLGL LERFPLGDTT
QGYGFGSAKT VHLMIEAMRL AFADRAVWIG DDDARALPQA ALLHPQYQAA RAALIDPARR
IEQASAGDPT RWAPAATKAP QRIRSRAESP QTTHFSIVDR WGNVVSYTST IEYTWGAGIT
VPGYGFLLNN ELTDFNFVPS ADSATGNPGA NDVAPGRRPR SSMAPTLLLK NGRPVAAYGS
PGGATIINSV LNMTLNLVDH GMTPGQAIAA PRVSVTSAAG KVACEGGEDF MQPRLSIAVQ
DRLRALGHVG LGEAGTDGCQ GRIGSVQAVV VDLTSGAQYG AADPRREGTV IRVGPGAPLA
P
|
|---|
| |