Gene Tbd_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1406 
Symbol 
ID3672507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1490801 
End bp1491499 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID637710091 
Productrespiratory nitrate reductase gamma subunit 
Protein accessionYP_315164 
Protein GI74317424 
COG category[C] Energy production and conversion 
COG ID[COG2181] Nitrate reductase gamma subunit 
TIGRFAM ID[TIGR00351] respiratory nitrate reductase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCA ATACCCTGCT CTTCGGCGTC TACCCCTACG TCGCCCTCAC GGTGTTCCTG 
CTCGGCAGCT GGATACGTTT CGACCACGAG CAATACACCT GGAAAAGCGA TTCTTCGCAG
CTGCTGTCGA AAAAAGGCCT GCGGCTGGCG AGCAACCTCT TCCACGTCGG CATCATCGGC
CTGTTCTTCG GCCACGCCGC GGGCCTGCTC ATCCCCCACA GCGTCTTCCT CGCGCTCGGC
GTGTCCGACC TGACCCATCA GTGGATCGCC ATCAGCGCCG GCACCGTCTT CGGCACCCTG
ACGCTGCTCG GCGCGGCCCT GTTGTGGGTG CGCCGCATGT TCACGCCGCG CGTGCGCGCC
GCCTCGCGCC GCGTCGACCT CCACATCCTG GGCTGGCTCG CGCTGACTGC CTTCATCGGC
CTGTCGACGA TCCCGGCGTC GATTCACCAC GCGAACGCGG GCGACGCGAG CACCATGATC
CGGCTCGCCG ACTGGGTGCA GAGCATCGTC TACCTGCAGC CGAAGCCGGC GCTGCTTCGC
GACGTCGATC TCGTCTACAA GCTCCACGTC TTCGTCGGCG TCTCGGTGTT CCTGTTCTTC
CCGTTCACCC GGCTGGTCCA TATCTGGAGC GCGCCCTTCG GCTACCTCGG CCGCGCCTAC
CAGATCGTGC GCAGCAAGCG CGGCCTGGTG CGGGGGTGA
 
Protein sequence
MDLNTLLFGV YPYVALTVFL LGSWIRFDHE QYTWKSDSSQ LLSKKGLRLA SNLFHVGIIG 
LFFGHAAGLL IPHSVFLALG VSDLTHQWIA ISAGTVFGTL TLLGAALLWV RRMFTPRVRA
ASRRVDLHIL GWLALTAFIG LSTIPASIHH ANAGDASTMI RLADWVQSIV YLQPKPALLR
DVDLVYKLHV FVGVSVFLFF PFTRLVHIWS APFGYLGRAY QIVRSKRGLV RG