| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1400 |
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| Symbol | |
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| ID | 3672501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1479590 |
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| End bp | 1481524 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637710085 |
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| Product | periplasmic sensor Signal transduction histidine kinase |
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| Protein accession | YP_315158 |
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| Protein GI | 74317418 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.324076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGGCCCT GTAGACAAGG CGCAAGGGAG AAAGCGGTGA TCCGTTCGGG GCGGACCAAA
CTCGAGAACT CGCTGCTCAT GCGGCTGGGC GGCATGTTTG TCGCGATCAC CGTGCTCGCG
GTCACCAGCA TGTCGACCTC GTGGATGGTG GCCGAGACGA TCCAGGGCAG CGGCGAGGCG
ATCAACCTTG CCGGCAGCCT GCGCATGCAG AGTTGGCGCA TGGCTGCGAT CTATCAGCGG
CTGCAGAGCG ACGGCGCAAC TGAAGACGCG GAGGATCTGG GGGAGGCGAT CGCCCGCTTC
GAGGCCGACC TCAAGGCGGC ACCGATTCTC GCCGTGCTGC CGAGCGACGA GACCACGCCG
CTCTGGCACG TCTACCGGCA GGTCGAAAAC GACTGGCGCA CCGTCGTCAA GCCCGGCTTG
CAGGTCACGC CGGCCGCCGG GCGGCCCGCG CGCGGCAGCG TGCTCGACGA CATTCCGGCG
TTCGTCGCCC ACATCAACGA CCTGGTCAAA CAGATCGAGG ACGCGGCCGA GGCCAAGATC
CTGGTCATGC GCGTGATCCT CGGAGCAGCC GTGATCGCGA CGATGCTCGT CGTGGCGCTT
GCCATCTATC TGGTCAACAA CATTCTCGTC TACCCGCTGC GCGGCCTGCT CGGGCTGGCC
GACCAGATCG GCCAGGGCAA TCTCGCGGTG CGCAACGATC TGACCGGCGA GGACGAGATC
GGGCGGCTCG GCCAGGCTTT CAACCACATG GCCGAAGACC TCTCGATGCT TTACCAGAAC
CTCGAGGCGC GGGTCGAGGA GAAGACCGCG GAACTGACGA TTGCCAACCG TTCGCTCGAA
CTGCTTTATC ACTCGATCGC GCGGCTCTAC AACGGCCCGA TCGCCCCCCG TACCTACGAG
ATCCTGCTCA AGGACCTGGA GAACGTGCTC GGCCTCGGGC ACGGCCTCGC GTGTCTGGTG
GAAGGCGACG GCGCGACGCG CGGGCGCGTG ATCGCGAGCA CCTTGCCGCC GCTGCCCGAG
GGGGCCGACC CCTGCAGCGT CATGAGCTGC GCCGAGTGTC TCGCGCGCCC GGCGCTCGCG
GTCCACCCGC TCGGCGACGG CCGGCGCGTG CTGTCGCTGC CGCTGAACGA CACCGAGCAG
CTGTATGGCG TGTTGCAACT CGAAATGCCG CCGGGCAAGG AACTGGTCCA GTGGCAAAGC
CAGTTGCTCG AAGCGCTGTC GCGCCACATC GGCATTGCGA TCGGCACCGC GAGGCGCACC
GAGCAGAGCC GTCGACTGTC GCTGCTCGAC GAGCGCGCCG CGCTCGCGCG CGACCTGCAC
GATTCGCTCG CGCAGTCGCT CGCCTACATG AAAATCCAGG TCAGCCGGCT CAAGCCGCTG
GTCGAAGGGT CGGGCGCCGG CAGCGAGGCC GGCGACGTGC TGGCCGAGTT GCGCGAAGGT
CTCAACAGCG CGTACCGCCA GCTACGCGAA CTGCTGACGA CCTTCCGCCT GCGAATCGAG
GGTGAAGGCC TCGGCGCCGC GCTGCAGACC ACGGTGACCG AATTCTCCAA CCGCGGCGGC
ATTCCGATCA CGCTCGTCGT CCATCTGGCC GGGTGCAAGC TCACGCCGAA CGAGGAAATC
CATGCGCTGC AAATCGTGCG CGAGGCGCTG TCCAACGTGC TCAATCACGC CCAGGCGCGC
CAGGCCGAGG TCAGTGTGAG CTGCAACAGC GACGGATCGG TGTCGGCCAC CGTGACCGAC
GACGGCATCG GCATCCACGG GACTGCACGC GCCCACCATT ACGGGATGAC GATCATGGAA
GAGCGTGCGA AAAACCTCGG CGGCCGGCTC AGCGTCGAGA ACCTTGCTGC ACGGGGCACG
CGCGTGGCCC TCCACTTCGT GCCGAGCACG CGGCGCGAGG ACAACGGTAC GATTCACCCC
ATTCAACCGA GCTGA
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| Protein sequence | MGPCRQGARE KAVIRSGRTK LENSLLMRLG GMFVAITVLA VTSMSTSWMV AETIQGSGEA
INLAGSLRMQ SWRMAAIYQR LQSDGATEDA EDLGEAIARF EADLKAAPIL AVLPSDETTP
LWHVYRQVEN DWRTVVKPGL QVTPAAGRPA RGSVLDDIPA FVAHINDLVK QIEDAAEAKI
LVMRVILGAA VIATMLVVAL AIYLVNNILV YPLRGLLGLA DQIGQGNLAV RNDLTGEDEI
GRLGQAFNHM AEDLSMLYQN LEARVEEKTA ELTIANRSLE LLYHSIARLY NGPIAPRTYE
ILLKDLENVL GLGHGLACLV EGDGATRGRV IASTLPPLPE GADPCSVMSC AECLARPALA
VHPLGDGRRV LSLPLNDTEQ LYGVLQLEMP PGKELVQWQS QLLEALSRHI GIAIGTARRT
EQSRRLSLLD ERAALARDLH DSLAQSLAYM KIQVSRLKPL VEGSGAGSEA GDVLAELREG
LNSAYRQLRE LLTTFRLRIE GEGLGAALQT TVTEFSNRGG IPITLVVHLA GCKLTPNEEI
HALQIVREAL SNVLNHAQAR QAEVSVSCNS DGSVSATVTD DGIGIHGTAR AHHYGMTIME
ERAKNLGGRL SVENLAARGT RVALHFVPST RREDNGTIHP IQPS
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