Gene Tbd_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1394 
Symbol 
ID3672495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1476210 
End bp1476731 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID637710079 
Productputative lipoprotein involved in nitrous oxide reduction 
Protein accessionYP_315152 
Protein GI74317412 
COG category[C] Energy production and conversion 
COG ID[COG4314] Predicted lipoprotein involved in nitrous oxide reduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.146904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGT CGCGCCCCGC AGGCGTCCTG ATCCTCGTGG CCGCCGGCGC CCTCGCCGCC 
TGCGGCCAGG ACAAGATAGC CGAGAAAGTC GCTCCGCTCG AGATTACGCA GGGCACGTCC
TGCAGCCTCG ACGGCATGCT GCTCGCCGAT TACCCCGGCC CCAAGGCGCA GATCTTCTAC
GCCGGACAGA CCGAGCCCGA GTTTTTCTGC GACACGGTCG AGATGTTCCA CGTCTACCTC
AAACCCGAGC AGGTGCGTCC GGTGCGCGGC ATTTTCGTCC AGGACATGGG GAAAGCCGAC
TGGGACGAGC CGCGCGACAA CTGGATCGAC GCGACGGCCG CCTACTACGT CCACGGCAGC
AAACGACGCG GCTCGATGGG ACCGACCCTG GCGAGCTTCG CCTCCGAAGG CGACGCGACC
AAGTTTGCGG CCCAATACGG CGGCAAGGTC TATCGTTTCG CCGACGTCAC GCCCGATATG
GTCGTGCTCG ACGGCGGCGC CCTCCACGAC AGCACCATGT AA
 
Protein sequence
MNLSRPAGVL ILVAAGALAA CGQDKIAEKV APLEITQGTS CSLDGMLLAD YPGPKAQIFY 
AGQTEPEFFC DTVEMFHVYL KPEQVRPVRG IFVQDMGKAD WDEPRDNWID ATAAYYVHGS
KRRGSMGPTL ASFASEGDAT KFAAQYGGKV YRFADVTPDM VVLDGGALHD STM