Gene Tbd_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1392 
Symbol 
ID3672493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1474430 
End bp1475386 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content67% 
IMG OID637710077 
ProductABC transporter ATPase 
Protein accessionYP_315150 
Protein GI74317410 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAAGTA TTTCCCCGGC GCACGCTGAG TCCCGCGCCA CCCCGGCGCA CGACAACGTC 
GTCGTCGCCC GCGCGGTTAG AAAACACTAC GGCGCCGTCC ACGCCGTCGA CGGCGTCGAT
CTCGAAATCC GCCGCGGCGA GTTGTTCGGC CTGATCGGCC ACAACGGCGC GGGCAAGAGC
ACGCTGTTCA AGACGATGCT TGGCCTGATT CCGCTGAGTT CGGGCGAGAT CCTGATCGAT
GGCGCCTCGG TATCGGGCAG CGGCTTTCGC GCGGTGCGGC GCAAGATCGG CTATCTGCCG
GAAAACGTCG TGCTCTACGA GAACCTCACC GGGCTCGAAA CGCTGCAGTT CTTTTCCCGG
CTCAAGGGCG CCGCGCTGCG CGAATGCGCG CCTGCGCTCG AGCGGGTAGG CCTGGCCGCC
GCGGCGAAGC GCCGCGTGCG CGAATATTCC AAAGGCATGC GGCAGCGCCT CGGATTCGCC
CAGGCCCTGC TCGGCAAGCC CCAGATCCTG TTCCTCGACG AGCCGACGAC CGGCCTCGAC
CCCGAAGCGA TCCGCGAGTT TTACAGCATC CTGCGCGCGC TTCGCGCCGA GGGCGTGACC
GTGGTCCTGA CGTCGCACAT CCTGGCCGAG ATCCAGGAGC GCGTCGACCG CCTCGCCATC
ATGGCTGCGG GCAAGATTCA GGCGCTCGGC AGCGTCCAGT CCCTGCGCGA GCAAATGGAC
CTGCCGCTCT GGTTCGACAT CCACATCGCG GCCGAGCACT TCGACACCGT GCGCACGGCG
CTCGGCCATC TGCCGGTCAT CGCAGTCGAC GCGCGCGGCG ATCATGTCGC CGTCCAGTGC
CGGCGCGAAA GCAAGATGGC CGTACTCGAA GCGCTGGCGG CACTCGACGG CCGCGTGCTC
GACCTGCACG TGCGCGAACC CTCGCTCGAA GACGTATTCT TCGGTTTTTC CGACTAA
 
Protein sequence
MASISPAHAE SRATPAHDNV VVARAVRKHY GAVHAVDGVD LEIRRGELFG LIGHNGAGKS 
TLFKTMLGLI PLSSGEILID GASVSGSGFR AVRRKIGYLP ENVVLYENLT GLETLQFFSR
LKGAALRECA PALERVGLAA AAKRRVREYS KGMRQRLGFA QALLGKPQIL FLDEPTTGLD
PEAIREFYSI LRALRAEGVT VVLTSHILAE IQERVDRLAI MAAGKIQALG SVQSLREQMD
LPLWFDIHIA AEHFDTVRTA LGHLPVIAVD ARGDHVAVQC RRESKMAVLE ALAALDGRVL
DLHVREPSLE DVFFGFSD