Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1378 |
Symbol | |
ID | 3672479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1458746 |
End bp | 1459828 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637710063 |
Product | Ni-Fe hydrogenase, small subunit |
Protein accession | YP_315136 |
Protein GI | 74317396 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.38439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAA GCCCGTTGAT CGACATGCTC GGACGGCAAG GGGTCACGCG CCGCGGCTTT CTCAAGTACT GCGCCACGCT GGCTTCGCTG ATGGCCTTGC CGCCCGCGGC GGGCCGGGCG ATGGCCGAGG CCATCGGCGC CGTCAGGCGG CCGTCGGTGA TCTGGCTGCC GTTCCAGGAA TGCACCGGTT GCACCGAATC GATCACGCGC TCGCATTCGC CGACCATCGA GGGCCTGATT TTCGAGGCGA TCTCGCTCGA CTACCAGGAA ACGCTGATGG CCGCCGCAGG GCATCGGGCC GAGGCCGCGC GCGACGCCGC GATACGCGAC AACTTCGGCA AATATCTGCT CGTCGTCGAC GGCTCTGTCC CGCTCGGCGC CGAGGGCGCC TATTCGTGCA TCGGCGGGCG CTCCAACGTC GACATCCTGC GGGAGGCGGC CAAAGGCGCC GCGGCCATCA TCTGCGTCGG CACCTGCTCG TCGTACGGGG GCATTCCCCA CGCCAACCCG AATCCGACCG GCGCGGTCGC GGTCTCCGAC GTCATCAAGG ACAAGCCCAT CGTCAACATT CCGGGCTGTC CGCCCATCCC GGTCGTCATG ACGGGCGTGC TCGCGCATTA CATCGCCTTC GGCAGCCTGC CCGAACTCGA CGCGAAGAAC CGGCCCAAGG CCTTCTTCGG CGAGACCATC CACGATCGCT GCTATCGCCG GCCTTTCTAC GACCAGGGCA AATTCGCCAA GACCTTCGAC GACGAGGGCG CGCGCAAGGG CTGGTGCCTG TTCGAGCTCG GGTGCAAGGG TCCGGTCACC CACAACGCCT GCGCGACCGT CAAATGGAAT GGCGGCACCT CCTGGCCGGT CGAGTCGGGC CACGGCTGCC TCGGATGTTC CGAGCCCGAC TTCTGGGACG CCGGCAGCTT CTACAAGGCA TTGTCGCAGC CTTCCGGGCC GCTGAACGTC GGACTCGCCG CGACAGCTGG CGGGCTCGCG ACCGGCGCCG CCGTCACGGT CGCCAACCGC GCGAAGAAAA GCGCGGCGCG GGCGTCGCAC AGGACGATCA CGGTCGAGGA TCTGGAGAAA TGA
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Protein sequence | MQQSPLIDML GRQGVTRRGF LKYCATLASL MALPPAAGRA MAEAIGAVRR PSVIWLPFQE CTGCTESITR SHSPTIEGLI FEAISLDYQE TLMAAAGHRA EAARDAAIRD NFGKYLLVVD GSVPLGAEGA YSCIGGRSNV DILREAAKGA AAIICVGTCS SYGGIPHANP NPTGAVAVSD VIKDKPIVNI PGCPPIPVVM TGVLAHYIAF GSLPELDAKN RPKAFFGETI HDRCYRRPFY DQGKFAKTFD DEGARKGWCL FELGCKGPVT HNACATVKWN GGTSWPVESG HGCLGCSEPD FWDAGSFYKA LSQPSGPLNV GLAATAGGLA TGAAVTVANR AKKSAARASH RTITVEDLEK
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