| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1375 |
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| Symbol | |
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| ID | 3672476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1454962 |
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| End bp | 1456752 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637710060 |
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| Product | Ni-Fe hydrogenase large chain |
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| Protein accession | YP_315133 |
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| Protein GI | 74317393 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0200361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAA CACAGCGCGT CGTCGTCGAT CCCATCACGC GCATCGAGGG CCATCTGCGC
ATCGAGGCCG AGACCGACGT CGACGGCAGG ATCCTCAAGG CGTACTCGGC CGGAACCATG
GTGCGCGGGA TCGAGATCAT CCTGCGGGGC CGCGATCCGC GCGACGCGTG GGCCTTCGCG
CAGCGCATCT GCGGGGTCTG CACGCTCGTG CACGGGGTCG CCTCGGTGCG CTCGGTCGAG
GATGCGCTGC ACCGCGCGAT CCCCGGCTAT GCGCTGCCGC CGAACGCGGA GCTGATCCGC
AACCTGATGA TCGCGGCGCA GCACGTCCAC GACCACGTCA TGCACTTCTA TCACCTGCAC
GCACTCGACT GGGTCGACGT CGTCTCGGCC TTGAAGGCCG ATCCGCGCGC GGCCTCGACG
CTGGCGCAGT CGATCTCGGA CTACTCGCGG TCGTCGCCCG GGTATTTCGC CGACGTGCAG
CGAAAGGTGA AGACCTTCGT CGAACAGGGT CAGCTCGGAA TCTTCGCCAA CGGCTACTGG
GGCCACCCGG CCTACAAGCT GCCGCCCGAA GCGAACCTGA TGGCGCTCGC GCATTATCTC
GACGCGCTCG CCTGGCAGCG TGAGGTCGTC AAGCTGCACG CGATCTTCGG CGGCCGCAAT
CCGCATCCGA ATTTCGTCGT CGGCGGCGTG CCGTCGGCGA TCTCGGTCTT TCCCACCGAG
GGCCGCGGCA AGGGGCCGCA TTACCGCGGC GGCCAGGACG CGACCGCGGT CAACATGGTC
GGCCTGCAGA CGGTGCAGAC CGTCATTCGC CAGATGCGCG AGTTCGTCGA CCAGGTCTAT
CTGCCGGACA CCCTTGCGAT CGCCCGCTAC TACAAGGACT GGGCGGGGCG CGGCGAGGGC
CTGGGCAATT TCCTGTCCTT CGGCGACCTG CCGTCCAAGG GATTCTGGGA TACGGATTCC
TATTTCATTC CGCGCGGCGT CATTCTCGAT CGTGACCTGA CGCGGGTCCA CCCGATCGAC
CTCGACGACG ACAAGGAAAT CCAGGAATTC GTCAGTCACT CCTGGTATCG CTACGAAGGC
GGCGACGCCC AGGGCCTGCA CCCGTTCAAG GGCGAAACCG CGCTGAACTA CACCGGACCC
AAGCCGCCCT ATGAGCAGCT CGACGTCGCG CAGAAATACT CGTGGATGAA GTCGCCGCGC
TGGAAGGGCA AATCGATGGA AGTCGGCCCG CTCGCACGCG TGCTCGTGAT GGTCGCCAAG
GGCGACAAAC AGGCGAAGGA ACTCGTCGAC CGCGCGCTGA AGACGCTCGA TCTGCCGGTC
ACGGCGCTCT ATTCGACGCT GGGGCGGACC GCGGCACGCA CGCTCGAGTC GAAAATACTC
GCCGACGCGA TGCAGGGCTG GTTCGATCAG CTCATGGCGA ACATCAAGGC CGGCGACCTG
CGCACCTTCA ACGAAAAATA CTGGGATCCC TCGACCTGGC CAGCGCACAT GCAAGGCGTC
GGCCTCATGG AGGCGCCACG CGGCGGCTTG GCCCACTGGA TCGTCGTCGA CGACGGCAGG
ATCAGCAACT ACCAGGCGGT CGTCCCGAGC ACCTGGAATG CGGGCCCGCG CGACGCGGCC
GGGCAGCCGG GCGCCTACGA GGCGGCCCTG CAGCACAACC ACACGATGCT CGACCCGAAG
CAGCCGATCG AGATCCTGCG CACGATCCAT TCCTTCGACC CCTGCATCGC CTGCGCCGTC
CACGTGGTCG ATCCGGACGG TGAGGAACTC GTGCAGGTGA AGGTCAAATA A
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| Protein sequence | MATTQRVVVD PITRIEGHLR IEAETDVDGR ILKAYSAGTM VRGIEIILRG RDPRDAWAFA
QRICGVCTLV HGVASVRSVE DALHRAIPGY ALPPNAELIR NLMIAAQHVH DHVMHFYHLH
ALDWVDVVSA LKADPRAAST LAQSISDYSR SSPGYFADVQ RKVKTFVEQG QLGIFANGYW
GHPAYKLPPE ANLMALAHYL DALAWQREVV KLHAIFGGRN PHPNFVVGGV PSAISVFPTE
GRGKGPHYRG GQDATAVNMV GLQTVQTVIR QMREFVDQVY LPDTLAIARY YKDWAGRGEG
LGNFLSFGDL PSKGFWDTDS YFIPRGVILD RDLTRVHPID LDDDKEIQEF VSHSWYRYEG
GDAQGLHPFK GETALNYTGP KPPYEQLDVA QKYSWMKSPR WKGKSMEVGP LARVLVMVAK
GDKQAKELVD RALKTLDLPV TALYSTLGRT AARTLESKIL ADAMQGWFDQ LMANIKAGDL
RTFNEKYWDP STWPAHMQGV GLMEAPRGGL AHWIVVDDGR ISNYQAVVPS TWNAGPRDAA
GQPGAYEAAL QHNHTMLDPK QPIEILRTIH SFDPCIACAV HVVDPDGEEL VQVKVK
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