Gene Tbd_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1359 
Symbol 
ID3672460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1438790 
End bp1439500 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID637710044 
ProductABC transporter ATPase 
Protein accessionYP_315117 
Protein GI74317377 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA AAGGCATCCA CCTCGAGGGT CTGAAAAAAC GCTACGGCGA AGGCGACACC 
GCCGTCGACG CGCTGAAGGA CGTCGACATG CACGTCGCGC CCGGCGAGGT CGTCGGCCTG
ATCGGTCCGT CAGGGTCGGG CAAGAGCACC TTGCTCAAGT GCCTCGGCGC GGTCATCGAC
CCGACCGCGG GGCGCATGAC GCTGGGCGAG GAAACGATCT ACGACGGCGG CTGGAAAGTC
CGCGACCTGC GCGCCTTGCG CCGTGACAAG ATCGGCTTCG TGTTCCAGGC GCCTTACTTG
ATCCCCTTCC TCGACGTCAC CGACAACGTT GCGCTGCTGC CCATGCTCGC GGGTGTCCCC
AACGCCGAGG CGCGGGCCAA GGCGCTCGAA TTGCTCACCG CGCTCGACGT GCAGCACCGC
GCGCGCGCCA TGCCCTCGCA GCTGTCGGGC GGCGAGCAGC AGCGCGTCGC GATCGCGCGC
GGCCTCGTCA ACCGCCCGCC CGTGATCCTG GCCGACGAGC CGACCGCGCC CCTCGACAGC
GAACGCGCGA TGGCGGTCAT CCGCATCCTC AACGATATGG CGCGCAAGTT CGAAACCGCG
ATCATCGTCG TCACCCACGA CGAAAAGATC ATCCCGACCT TCAAGCGCAT CTACCACATT
CGCGACGGCG TGACCCACGA GGAAGCCGGG GAAGGGCGGG GATTCGAATG A
 
Protein sequence
MSGKGIHLEG LKKRYGEGDT AVDALKDVDM HVAPGEVVGL IGPSGSGKST LLKCLGAVID 
PTAGRMTLGE ETIYDGGWKV RDLRALRRDK IGFVFQAPYL IPFLDVTDNV ALLPMLAGVP
NAEARAKALE LLTALDVQHR ARAMPSQLSG GEQQRVAIAR GLVNRPPVIL ADEPTAPLDS
ERAMAVIRIL NDMARKFETA IIVVTHDEKI IPTFKRIYHI RDGVTHEEAG EGRGFE