| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1333 |
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| Symbol | |
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| ID | 3672261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1414625 |
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| End bp | 1417807 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637710018 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_315091 |
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| Protein GI | 74317351 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCGC GCCTGATTCG CTGGTCGGTC GCCAACCGTT TCCTGGTCCT GCTGGCGACG
CTGTTCACCG TGGCCTGGGG CATCTGGGCG GTTAAGACCA CGCCGATCGA CGCACTGCCC
GACCTGTCCG ACGTTCAGGT CATCATCCGC ACCGCGTATC CGGGGCAGGC GCCGCAGATC
GTCGAAAACC AGGTGACCTA TCCGCTCGCC ACCACCATGC TTTCGGTGCC GGGCGCGAAG
ACGGTGCGCG GGTTCTCCTT TTTCGGCGAC AGCTTCGTCT ACGTCATTTT CGAGGACGGC
ACCGATCTCT ACTGGGCGCG CTCGCGGGTG CTGGAATATC TCAGCCAGGT GCAGGCCCGG
CTGCCGGCGA CGGCCAGGCC GGCGCTGGGC CCGGACGCGA CCGGGGTGAG CTGGATTTAC
CAGTACGCGC TGGTGGACCG CACCGGCAAG CACGACCTGG CGCAATTGCG CAGCCTGCAG
GACTGGTTCC TCAAGTACGA GCTGAAAACC CTGCCCAACG TGGCCGAGGT GGCCACCGTC
GGCGGCATGG TCAAGCAGGT TCAAGTAATG CTCGATCCGG TGAAGCTCGC CGGTTTCGGC
GTCACCCATG ACCAGGCGAT CGCGGCGATC CGGGCGGCCA ACCAGGAGAC CGGCGGCGCG
GTGCTGGAAC TGGCCGAGAC CGAACTCATG GTGCGCGCCA GCGGCTATCT CGAGAGCGTG
GCCGACTTTC GCGCCATTCC GCTCAAGCTC GCGGGGACGA CGCCGGTGAG CCTGGGCGAC
GTGGCGCACA TCCAGCTCGG CCCCGAGATG CGGCGCGGCA TCGGCGAGCT CGACGGCGAG
GGCGAGGCGG TCGGCGGCGT CGTGGTGCTG CGCTCGGGCA AGAACGCGCG CGAGACCATC
GCGGCGGTCA AGGCCAAACT CGACACGCTC AAGGTTAGCC TGCCGGCGGG CGTCGAAATC
GTGCCGACCT ACGACCGCAG CCAGCTGATC GACCGCGCGA TCGACAACCT GAGCGACAAG
CTGGTCGAGG AATTCATCGT CGTGGCGCTG GTGTGCGCGC TCTTCCTGTG GCACCTGCGC
TCGTCGCTTG TCGCCATCGT CTCGCTGCCG CTGGGGGTGC TGATCGCGTT CATCGTCATG
CGCCAGCAGG GCATCAATGC CAACATCATG TCGCTCGGCG GTATCGCCAT CGCCATCGGC
GCGATGGTCG ACGCCGCGGT GGTGATGATC GAAAACGCCC ACAAGAAAAT CGAGGCCTGG
CACCACGCCC ACCCCGGCGA AACGCTGGCC GGCGAGACCC ACTGGAAGGT GGTGACCGAC
GCGGCGGCCG AGGTCGGCCC GGCGCTGTTC TTCTCACTCT TGATCATCAC CCTGTCCTTC
ATCCCGGTGT TCACGCTGGA AGCGCAGGAA GGGCGGCTCT TCGGCCCGCT GGCCTTCACC
AAGACCTATG CCATGGCGGC CGCCGCCGGC CTGTCGGTGA CGCTGATTCC GGTGCTGATG
GGCTACTGGA TCCGCGGAAA AATTCCTGAC GAGACGAAGA ACCCGCTCAA CCGCTGGCTG
ATCCGCGCCT ACCACCCGCT GCTGGAAGCC GTGCTCAGGC GCCCCGGAAT CACGCTCGCC
GGCGCCGCGC TGATCTTCCT GACCGCGCTG TGGCCCATGA GCCGCCTCGG CGGCGAGTTC
CTGCCGCCGC TGGACGAGGG CGACCTGCTC TACATGCCGT CGGCCCTGCC GGGGCTGTCG
GCGCAGAAAG CCTCCGAGTT GCTGCAGCAA ACCAACCGCA TGATCCGGAG CGTGCCCGAA
GTAGCCCGCG TCTACGGCAA GGCCGGGCGC GCCGAGACCG CGACCGATCC GGCGCCGCTG
GAAATGTTCG AGACCACGAT CCAGTTCAAG CCGCGCGAGC AGTGGCGCGC CGGTATGACG
CCGGACGAGC TGGTCGAGGA ACTGGATCGC GCGGTCAGGG TGCCGGGGCT CGCCAACATC
TGGGTTCCAC CGATCCGCAA CCGCATCGAC ATGCTCGCCA CCGGCATCAA GAGCCCGGTC
GGGGTCAAGA TCGCCGGCAG CCATCTGGCC GACATCGACC GCATCGCGCA GGACGTCGAG
CGCGTCGCCA AGACCGTGCC CGGCGTCTCC TCTGCGCTGG CCGAGCGGCT CACCGGCGGC
CGCTACGTCG ACGTCGACAT CGACCGCGCG GCGGCGGCGC GCTACGGCAT GAACATCGGC
GACGTGCAGT CGGCGGTGGC CAACCTCATC GGCGGCGAAA ACATCGGCGA GACGGTCGAA
GGCCTGGCGC GTTATCCGAT CAACGTGCGC TACCCGCGCG AATGGCGCGA CACGCCCGAC
AAGCTCGCCG CGCTGCCCAT CCTCGCCCCC AACGGCAGCC GGATCACGCT CGGCATGGTG
GCGGCAGTCA GGGTCAGCGA CGGCCCGCCG ATGCTGAAAA GCGAGAATGC GCGGCCCTCG
GGCTGGGTCT ATGTCGACGT GCGCGGGCGC GACCTCGCCT CCACCGTGGC CGATCTTCAG
GCCGCCGTGG CCGCCGGGGT CAAGCTCGAA CCCGGCATGA GCCTCGCCTA TTCCGGCCAG
TTCGAGTTCA TGGAACGCGC CAACGCACGG CTCAAGCTGG TCGTGCCCGC CACGTTGCTG
ATCATCTTCG TGCTGCTCTA TCTCACCTTC AGCCGCTTCG ACGAAGCCGT GCTCATCATG
GCCACGCTGC CGTTCGCCCT CACCGGCGGC GTGTGGTTCC TCTACGCCAT GGACTACCAG
CTGTCGGTCG CCACCGGCGT CGGCTTCATC GCACTGGCCG GCGTGTCGGC CGAGTTCGGC
GTCATCATGC TGCTGTACCT GAAAAACGCC TGGGACGCGA AGCGCGAAGA AGGCAAAACC
GGCGAGGCCG ATCTGGGCGA GGCTGATCTC CTTGAGGCCA TCCGCGAAGG CGCGGTGCAG
CGCGTGCGCC CCAAGGCGAT GACGGTAGCG GTGATCGTCG CCGGCCTCTT GCCCATTCTG
TTGGGCAGCG GCACCGGCAG CGAAGTCATG AGCCGCATCG CCGCCCCCAT GGTGGGCGGC
ATGATCACCG CGCCGCTGTT GTCGATGTTT GTGATCCCGG CAGCCTACTA CCTGATGCGC
CGACCTCGCC CACAACCGCA CGCGCCAGCG CACCCCATTC ATTCAAGCGG CGAACACCCT
TGA
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| Protein sequence | MIARLIRWSV ANRFLVLLAT LFTVAWGIWA VKTTPIDALP DLSDVQVIIR TAYPGQAPQI
VENQVTYPLA TTMLSVPGAK TVRGFSFFGD SFVYVIFEDG TDLYWARSRV LEYLSQVQAR
LPATARPALG PDATGVSWIY QYALVDRTGK HDLAQLRSLQ DWFLKYELKT LPNVAEVATV
GGMVKQVQVM LDPVKLAGFG VTHDQAIAAI RAANQETGGA VLELAETELM VRASGYLESV
ADFRAIPLKL AGTTPVSLGD VAHIQLGPEM RRGIGELDGE GEAVGGVVVL RSGKNARETI
AAVKAKLDTL KVSLPAGVEI VPTYDRSQLI DRAIDNLSDK LVEEFIVVAL VCALFLWHLR
SSLVAIVSLP LGVLIAFIVM RQQGINANIM SLGGIAIAIG AMVDAAVVMI ENAHKKIEAW
HHAHPGETLA GETHWKVVTD AAAEVGPALF FSLLIITLSF IPVFTLEAQE GRLFGPLAFT
KTYAMAAAAG LSVTLIPVLM GYWIRGKIPD ETKNPLNRWL IRAYHPLLEA VLRRPGITLA
GAALIFLTAL WPMSRLGGEF LPPLDEGDLL YMPSALPGLS AQKASELLQQ TNRMIRSVPE
VARVYGKAGR AETATDPAPL EMFETTIQFK PREQWRAGMT PDELVEELDR AVRVPGLANI
WVPPIRNRID MLATGIKSPV GVKIAGSHLA DIDRIAQDVE RVAKTVPGVS SALAERLTGG
RYVDVDIDRA AAARYGMNIG DVQSAVANLI GGENIGETVE GLARYPINVR YPREWRDTPD
KLAALPILAP NGSRITLGMV AAVRVSDGPP MLKSENARPS GWVYVDVRGR DLASTVADLQ
AAVAAGVKLE PGMSLAYSGQ FEFMERANAR LKLVVPATLL IIFVLLYLTF SRFDEAVLIM
ATLPFALTGG VWFLYAMDYQ LSVATGVGFI ALAGVSAEFG VIMLLYLKNA WDAKREEGKT
GEADLGEADL LEAIREGAVQ RVRPKAMTVA VIVAGLLPIL LGSGTGSEVM SRIAAPMVGG
MITAPLLSMF VIPAAYYLMR RPRPQPHAPA HPIHSSGEHP
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