Gene Tbd_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1329 
Symbol 
ID3671901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1411877 
End bp1413154 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content68% 
IMG OID637710014 
Productcobalt-zinc-cadmium outer membrane resistance protein 
Protein accessionYP_315087 
Protein GI74317347 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCA CGCTATCCGT ATTGCTGCTC GCCCTGCCGT TGGCGGCGTG GGCGCAAACA 
CCGCAAACCC GGCTGAATGC AGGCACGCTG CGCGCCAGCG AACCAACGGC CCCGCTTACC
CTGAACGCGG CACTGAATCT GGCGCTTGGC GCCAACCCCG AGCTGTCGGC GGCGGGCCGC
GAACTGGAGG CGCTCGATGC CACCATCACT CAGGCACACG TCCGACCCAA CCCGGAATTT
TCGGCCTTGA TCGAGGACAC GCGCCGGGCG ACACGGACCA CGACGCTGCA GTTGAACCAG
CCGATCGAGC TGGGCGGCAA GCGTGGCGCC AGGATCGAAG CCGCCGAGCG CGGCCGTGAT
GCCGCGTCCC TGGAACTGGA CGCCAAGCGT GCCGAGATTC GCGCGGCGGT GACCGCGGCG
TTTTTCGACG TGCTGGTCGC CCAGGAGCGC TCGCGGCTTG CCCAGGCGTC GGTCGAACTC
GCGCAACGCG CGACGGCCGC AGCCGCACGG CGGGTCACGG CCGGCAAGGT GTCCCCGGTC
GAAGAAACCC GGGCGCGCGT GGCCGAGGCC GGCGCCCGCG TCGAACTCGC GACGGCCACC
AGCGAATTGA CGACCGCGCG CCGTCGGCTG GCAGCCACCT GGGCCAATCC GTCGCCGCGC
TTCGAACGCG CCGAGGGCGA TCCGGAAGCT TTGCCGCCGC TCCCTGCGCT GGCCCATCTG
AACGCGCGCC TCGCCGCTTC GCCCAGCCTG CTCCGCGCCA AGATCGAGGT CGAGCGCCGG
CAAGCGCTGG CGAAGGTCGA ACGCAGCCGT CGCGTTCCGG ACCTGACGCT CAGCCTCGGG
GCCAAACGCG ACGAAGAGCG CGGCCTCAAT CAGGCGATTT TCGGCGTTTC GATACCGATC
CCGGTGTTCG ACCGCAATCA GGGAAACCTG CTGGAAGCGT TGCGCCGTAC CGACAAGGCG
CAGGACCAGC TGTCCGCCGA CGGGATCCGC CTGTTCAACG AACTGGCTGT TGCATACGAG
CGGCTGAGTA CCGCACGCCA GGAGACAGCA TCGCTGCGGC AGGACGTTCT TCCGGGCGCG
CAAAGCGCTC TGGATGCCGC AACCCGAGGC TTCGAACTCG GCAAATTCAG CTTTCTCGAC
GTACTCGATG CGCAGCGCAC GCTGTTTCAG GCCCGCGCGC AAAGCCTGCG CGCATTGGCC
GAAGCGCACC GGTCGGCGGC CGAAATCGAG CGCATTCTTG GCGATACACG TCCGGCACCC
GCTGCCGTCC AACCGTAG
 
Protein sequence
MRITLSVLLL ALPLAAWAQT PQTRLNAGTL RASEPTAPLT LNAALNLALG ANPELSAAGR 
ELEALDATIT QAHVRPNPEF SALIEDTRRA TRTTTLQLNQ PIELGGKRGA RIEAAERGRD
AASLELDAKR AEIRAAVTAA FFDVLVAQER SRLAQASVEL AQRATAAAAR RVTAGKVSPV
EETRARVAEA GARVELATAT SELTTARRRL AATWANPSPR FERAEGDPEA LPPLPALAHL
NARLAASPSL LRAKIEVERR QALAKVERSR RVPDLTLSLG AKRDEERGLN QAIFGVSIPI
PVFDRNQGNL LEALRRTDKA QDQLSADGIR LFNELAVAYE RLSTARQETA SLRQDVLPGA
QSALDAATRG FELGKFSFLD VLDAQRTLFQ ARAQSLRALA EAHRSAAEIE RILGDTRPAP
AAVQP