| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1327 |
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| Symbol | |
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| ID | 3671899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1406993 |
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| End bp | 1410172 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637710012 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_315085 |
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| Protein GI | 74317345 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.808518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACA AAATCATTCA GTTCGCCATC GAGCAGCGCT GGCTCGTCCT GCTCGCGGTC
CTGGGTATGG CCGCGTTCGG CGTCTACAGC TATCAGAAGC TGCCGATCGA CGCGGTGCCC
GACATCACCA ACGTGCAGGT TCAGATCAAC ACCGCCGCGC CCGGCTATTC GCCGCTGGAG
TCCGAGCAGC GCATCACCTT CCCCGTCGAG ACCGCGATGG CCGGGCTGCC GGGGCTGGAA
CAGACGCGTT CGCTGTCGCG CTACGGCCTG TCGCAGGTGA CGGTGATCTT CAGGGAAGGC
ACCGACATCT ATTTCGCACG CCAGCTGGTC AACGAGCGCA TCGGTCAGGC CAAGGGAAAA
CTGCCGGCAG GGATCAATCC GGAGTTGGGG CCGATCTCGA CCGGGCTGGG CGAGATTTAC
ATGTGGACGG TCGAGGCCAA ACCGGGTGCG CTGAAACCCG ACGGCGCCCC CTACACCGCC
ATGGATCTCA GGGAAATCCA GGACTGGATC GTCAAACCGC AGTTGCGCAA CGTGCCGGGT
GTGACCGAAA TCAACACCAT CGGCGGCTAC GCCAAGTCGT TTCAGGTATC GCCGCTGCCC
GACAAACTCG TCGCGCACGG CCTGAGTCTG ATGGATCTGG TCGCCGCTAT CGAGCGCAAC
AACGCCAACG TGGGGGCGGG CTACATCGAA AAACGCGGCG AGCAATACCT GATCCGCGCA
CCGGGACAGG TCGCCGATCT CGCCGACATC GGCAACATCG TCGTCGCCAG CCGCGAGGGC
GTTCCCGTAC GCATCCGCGA CGTCGCCGAA GTCGGCCTCG GGCAGGAGTT GCGCACCGGG
GCCGCAACCG AAAACGGCCG CGAAGTCGTG CTCGGCACCG TCTTCATGCT GATCGGGGAA
AACAGCCGCG TCGTCTCGCA GGCGGTCGCC AAGCGGCTCG AAGAAGTCAA TCGCAGCCTG
CCCGCCGGTG TCGTCGCGCA GAGCGTGTAC GACCGCACGA TCCTGGTCGA CAAGGCGATC
GACACGGTGA AGAAGAACCT GGTCGAGGGC GCATTGCTGG TGATCGCGGT GTTGTTCCTG
TTCCTCGGCA ACATCCGCGC GGCGGTTATT ACTGCGCTGG TCATTCCGCT GTCGATGCTC
TTCACCTTCA CCGGCATGGT CACGAACAAG GTCAGCGCCA ATTTGATGAG CCTCGGCGCG
CTCGACTTCG GCATCATCAT CGACGGCGCG GTGGTCATCG TCGAGAACTG CGTACGCCGG
CTCGCGCACG CGCAGGCGCA TTTCAAACGT CCGCTCACCC GCACCGAACG CTTCCATGAA
GTCTTCGCTG CCGCGCGCGA GGCGCGCCGC CCCCTGATTT TCGGCCAGCT CATCATCATG
GTCGTCTACC TGCCGATCTT TGCGCTCGCC GGCGTCGAGG GCAAGATGTT CCACCCGATG
GCGTTCACCG TCGTCGTCGC CTTGCTGGGC GCGATGATTC TGTCCGTGAC CTTCATCCCC
GCAGCGGTTG CGCTGTTGAT CGGCAACAAG GTCAGCGAAA AGGAAAACCG CCTGATGCAG
TGGGCGTCGC GCGGCTACGC GCCGATGCTC GCCTGGGGCA TGGGCAACAA GGCCCTGGTG
CTCACCGTTG CGGTGGTTGC GGTGGCGCTG TCCGGCCTGC TCGCGACCCG CATGGGCAGC
GAATTCGTGC CGAGTCTCAA CGAGGGCGAC ATTGCGCTGC ACGCCTTGCG CATCCCCGGC
ACCAGTCTGA CCCAGGCGAT CGAGATGCAG ACCGAGCTTG AACGCACGAT CAAGCAGTTT
CCCGAAGTCG AGCGGATTTT CGCCAAAATG GGCACCGCTG AAATCGCGAC CGACCCGATG
CCGCCGAGCG TGGCCGACAA CTTCATCATG CTGAAACCGC GGTCGGAATG GCCCGACCCG
AGCCGCACCA AGACCGAGCT TGTGATGGCC ATGCAGGAGG CGGTCGGCAA AGTGCCCGGC
AACAACTACG AGTTTACCCA GCCGATCCAG ATGCGCTTCA ACGAGCTGTT ATCTGGCGTG
CGCAGCGATG TCGCGGTCAA AGTGTTCGGC GACGACATGG ACACGATGAA CGGCACCGCC
GCCGAAATTT CCGAAGTGCT GGAAAAAATA CCCGGTGCGG CCGACGTCAA GGTCGAACAG
ACGACCGGGT TGCCGATGAT GACGATCCAG ATCGACCGGG AAAAAGCCGC CCGGCTCGGG
GTCAACGTCG GCGATATCCA GGAGGCGATC GGCATTGCCA TCGGTGGACG CGACGCCGGC
GTACTGTTCG AGGGCGACCG GCGCTTCGAC ATCGTCGTGC GCCTGCCGGA ACGCCTGCGC
AGCGATCTGG CGGCGCTGAA GCAACTGCCG ATCAGGATGC CCATGGACGC CATGACTGGC
GCGAGCCACG GCTATCTGCA ACTGGGCGAC GTCGCAAGCT TCATCGTCGC CCCCGGCCCC
AACCAGATCA GCCGGGAGGA TGGCAAGCGC CGCGTCGTCG TCACCGCCAA CGTTCGCGGC
CGCGACATCG GCTCGTTCGT CAATGAGGCC GATCTGGCGA TCCAGCAAAA CGTCAAGGTT
CCGACCGGAT ACTGGATCAC CTGGGGCGGC ACCTTCGAGC AATTGCAGTC GGCGGCCAAG
CGTCTGCAGA TCGTGGTGCC GGTGGCGTTG CTGCTGGTTT TCATGCTGCT GTTCGCGATG
TTCAACAACA TGAAGGACGG CATCCTGGTC TTTACCGGCA TCCCGTTCGC GCTTACCGGC
GGCATTCTCG CGCTGTGGCT GCGCGACATC CCATTGTCCA TTTCGGCAGG CGTCGGTTTC
ATCGCGCTGT CGGGGGTCGC GGTGCTCAAT GGCCTGGTGA TGGTGTCCTT CATCCGTACC
CTGCGCGAAC AGGGCCGCAC GCTCGATACC GCAATCGTTG ATGGCGCGCT CACCCGCCTG
CGTCCGGTTC TGATGACCGC GCTCGTCGCC TCGCTCGGCT TCATTCCGAT GGCCATCGCC
ACCGGCACCG GCGCGGAAGT GCAGCGGCCG CTTGCTACCG TCGTCATCGG CGGTATCCTG
TCTTCGACGG CGCTGACCCT GCTGGTCCTG CCGATCCTGT ACCGGCTGGC GCACAGGAAA
GAGGAAGAGA TCGAGGCGGG CGCAGTCGGT AGCGGCAGGC CACAGGCACA GCCCACCTGA
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| Protein sequence | MFDKIIQFAI EQRWLVLLAV LGMAAFGVYS YQKLPIDAVP DITNVQVQIN TAAPGYSPLE
SEQRITFPVE TAMAGLPGLE QTRSLSRYGL SQVTVIFREG TDIYFARQLV NERIGQAKGK
LPAGINPELG PISTGLGEIY MWTVEAKPGA LKPDGAPYTA MDLREIQDWI VKPQLRNVPG
VTEINTIGGY AKSFQVSPLP DKLVAHGLSL MDLVAAIERN NANVGAGYIE KRGEQYLIRA
PGQVADLADI GNIVVASREG VPVRIRDVAE VGLGQELRTG AATENGREVV LGTVFMLIGE
NSRVVSQAVA KRLEEVNRSL PAGVVAQSVY DRTILVDKAI DTVKKNLVEG ALLVIAVLFL
FLGNIRAAVI TALVIPLSML FTFTGMVTNK VSANLMSLGA LDFGIIIDGA VVIVENCVRR
LAHAQAHFKR PLTRTERFHE VFAAAREARR PLIFGQLIIM VVYLPIFALA GVEGKMFHPM
AFTVVVALLG AMILSVTFIP AAVALLIGNK VSEKENRLMQ WASRGYAPML AWGMGNKALV
LTVAVVAVAL SGLLATRMGS EFVPSLNEGD IALHALRIPG TSLTQAIEMQ TELERTIKQF
PEVERIFAKM GTAEIATDPM PPSVADNFIM LKPRSEWPDP SRTKTELVMA MQEAVGKVPG
NNYEFTQPIQ MRFNELLSGV RSDVAVKVFG DDMDTMNGTA AEISEVLEKI PGAADVKVEQ
TTGLPMMTIQ IDREKAARLG VNVGDIQEAI GIAIGGRDAG VLFEGDRRFD IVVRLPERLR
SDLAALKQLP IRMPMDAMTG ASHGYLQLGD VASFIVAPGP NQISREDGKR RVVVTANVRG
RDIGSFVNEA DLAIQQNVKV PTGYWITWGG TFEQLQSAAK RLQIVVPVAL LLVFMLLFAM
FNNMKDGILV FTGIPFALTG GILALWLRDI PLSISAGVGF IALSGVAVLN GLVMVSFIRT
LREQGRTLDT AIVDGALTRL RPVLMTALVA SLGFIPMAIA TGTGAEVQRP LATVVIGGIL
SSTALTLLVL PILYRLAHRK EEEIEAGAVG SGRPQAQPT
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