| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1324 |
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| Symbol | |
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| ID | 3671896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1403210 |
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| End bp | 1404895 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637710009 |
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| Product | copper-resistance protein CopA |
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| Protein accession | YP_315082 |
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| Protein GI | 74317342 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.210638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTC ATTCTCGATT CTTGCCTGCA ACGCCGAATC TCCCGCGCCG GCGGTTTCTC
CAGGGACTGG CGGCCGGCGG CATCTTGCTC GGTGCGCCCT CCTTGATACT GCCGGCCTCG
GCACGGGAAG CCGGCACGGC CGCAGGCAGT GCGCCGGTAC TCAGCGGCAC CGAATTTGAT
CTCACGATCG CGGAGACGGC GGTGAACTTC ACCGGTAAAC CGCGTATGGC GACGACGATC
AACGGCTCGA TTCCCGGGCC TACGCTGCGC CTGCGCGAGG GCGACACCGT GACCATCCGC
GTACACAACC GGCTGACCGA GGACACGTCG ATCCACTGGC ACGGCATCCT GCTGCCCTTC
GAGATGGACG GCGTGCCGGG CATCAGCTTC AAAGGAATTC CGCCCGGCCA GACCTTTACC
TACCGCTTCA AGGTGAAGCA AACCGGCACC TATTGGTACC ACTCGCACTC CGGCATGCAG
GAGCAGACCG GGATGTACGG CACGATCATC ATCGACCCCG CGCGTGGTAA CTCCGTCGGC
GCCGATCGCG ATTACGTCGT GCAATTGTCG GACTGGACCG ACGAGCATCC GATGCGGGTG
CTCCACAAGC TCAAGGTGCA GGGCGACTAC TTCAACTTCA ATCAGCCGAC CGCCGGGGAC
TTCTTCCGCG ACGTGTCGAA GGAAGGGCTC AAGGCCGCGA TCGACAAGCG CCGGATGTGG
AACGAGATGC GCATGAGCCC GACCGATCTG GCCGACGTCT CCGCTCACAC CTATACCTAT
CTGATGAACG GCGCGGCGCC GGCCGGCAAC TGGACCGGGC TGTTCCGCCC CGGCGGGAAG
GTGCGATTGC GCTTCGTCAA CAGTGCAGCG ATGACCTTCT TCGACGTGCG CATTCCGGGA
CTCAAGATGA CCGTCGTGCA GACCGACGGG CAGGATGTCG AACCGGTCAC GGTCGACGAA
ATCCGCATCG GCGTCGCAGA GACCTACGAC GTGATCGTGA GCCCCAAGGA CGAGGCGTAT
ACGATCTTCG CGCAGTCGAT GGATCGGACC GGCTTCGCGC GCGGCACGCT CGCGACCCGT
GCGGGACTTG TCGCGGCGGT TCCGTCACCG GACAAGCCCG TGGCGCTCGA AATGCAGGAC
ATGATGGGCG ACATGACCGG CCTCGCGCGG GCCCACCATG CCCGGACCGA GTATGGCCCC
AGTGTCGACA TGCGCGTCGA CACCCCGCGC ACCGACCTGG ACGACCCCGG CGTCGGCTTG
CGCGACAACG GCCGGCGCGT GCTGACCTAT GACCATCTCC ACAGCGTCGG CGGGCCGCTG
GACGCGCGGG GCCCCGGACG CGAGATCGAG CTCCATCTCA CCGGCAATAT GGAGCGCTAC
GCCTGGTCCA TTGACGGCGT TGAGTTCGAG AAGTCCACGC CGGTGCATTT CCGTCACAAC
GAGCGGCTTC GCGTGGTCTT CGTCAACGAT ACGATGATGA CGCACCCGAT GCACTTGCAC
GGGATGTGGA GCGAACTCGA AAGTCCGGAA GGGAAGTTCC AGGTGCGCAA GCACACGATC
GCAGTACAGC CCGCGCAGCG CGTGAGCTTT CTGGTCACCG CCGATGCCCT AGGGCGTTGG
GCATGGCACT GCCATTTGGG GCTGCACATG GACATGGGCA TGTTCCGCGA AGTCGTCGTG
GCCTGA
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| Protein sequence | MNPHSRFLPA TPNLPRRRFL QGLAAGGILL GAPSLILPAS AREAGTAAGS APVLSGTEFD
LTIAETAVNF TGKPRMATTI NGSIPGPTLR LREGDTVTIR VHNRLTEDTS IHWHGILLPF
EMDGVPGISF KGIPPGQTFT YRFKVKQTGT YWYHSHSGMQ EQTGMYGTII IDPARGNSVG
ADRDYVVQLS DWTDEHPMRV LHKLKVQGDY FNFNQPTAGD FFRDVSKEGL KAAIDKRRMW
NEMRMSPTDL ADVSAHTYTY LMNGAAPAGN WTGLFRPGGK VRLRFVNSAA MTFFDVRIPG
LKMTVVQTDG QDVEPVTVDE IRIGVAETYD VIVSPKDEAY TIFAQSMDRT GFARGTLATR
AGLVAAVPSP DKPVALEMQD MMGDMTGLAR AHHARTEYGP SVDMRVDTPR TDLDDPGVGL
RDNGRRVLTY DHLHSVGGPL DARGPGREIE LHLTGNMERY AWSIDGVEFE KSTPVHFRHN
ERLRVVFVND TMMTHPMHLH GMWSELESPE GKFQVRKHTI AVQPAQRVSF LVTADALGRW
AWHCHLGLHM DMGMFREVVV A
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