Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1308 |
Symbol | |
ID | 3671880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1387265 |
End bp | 1387939 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637709993 |
Product | hypothetical protein |
Protein accession | YP_315066 |
Protein GI | 74317326 |
COG category | [S] Function unknown |
COG ID | [COG5483] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.164659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGATA AGAGCCCTGC GATGTCGCAC GAGACCGCTT CCCCGCTGGT TCTGACGATC GGCCATTCGA CGCATCCGAT CGACGTTTTC ATCGGGCTGC TGCAGGCACA CGGCGCGGCT TCGCTGGTCG ATGTGCGCAC GGTGCCGCGC TCGCGGCACA ACCCGCAATT CAACACGGAG GCCCTGGCGC AGTCACTCGC CGATGCCGGT CTCGGCTACG TGCATGCGCC CGGTCTCGGC GGCCTGCGGC GCGCCAGGCC CGATTCGCCC AACGCCGGAT GGCGCAACGC CTCGTTTCGC GGCTATGCCG ACTACATGCA GACAGCCGAC TTCGCGCGCA GCCTCGACGC GTTGATCGCC CTCGCGCAGA CGCGGCGAAT CGTCCTGATG TGCGCCGAGG CCGTACCCTG GCGCTGCCAT CGTTCGCTCA TCGCGGATGC ACTCGTCCTC CGCGGCTTCC GCGTCGAACA CATCCTGAGC GCGACGCGCC GTCAGCTTCA CGCGCTCACA CCATTCGCGC GGGTGAGCGG CGGCACGCTC ACCTATCCAC CCGAGGCGGG ATCCGCGCCG GGGCAAGCGA CCGTCGCGAC GGACGGATGT TGCCCCAACG AGGGTGGAAC CACTCATATC GAAAATACCG ATGCAAAAGG CCAAAAAAGA TCGTTTGTTA AATAG
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Protein sequence | MSDKSPAMSH ETASPLVLTI GHSTHPIDVF IGLLQAHGAA SLVDVRTVPR SRHNPQFNTE ALAQSLADAG LGYVHAPGLG GLRRARPDSP NAGWRNASFR GYADYMQTAD FARSLDALIA LAQTRRIVLM CAEAVPWRCH RSLIADALVL RGFRVEHILS ATRRQLHALT PFARVSGGTL TYPPEAGSAP GQATVATDGC CPNEGGTTHI ENTDAKGQKR SFVK
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