Gene Tbd_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1303 
Symbol 
ID3671875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1373929 
End bp1374450 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content68% 
IMG OID637709988 
Producthypothetical protein 
Protein accessionYP_315061 
Protein GI74317321 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.529272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGCG TCGCGCCGGC GCGACGCCGG CCAGGGCGGC CAGCGCAGGG CGGGTTCACC 
TACATCGGCC TGCTGGTGCT GATCGCCTTG CTCGGCTTCA GCCTCGCGGC GACCGGCGTG
GTCTGGAGCC AGGCGCAGCA AAGGCAGAAG GAACGGGAGC TGCTTTTCAT CGGCAACCAG
TTCCGCGAGG CGATCGGCCG CTATTACCGC AGCACCCCCG GCCCGGTGAA GGAATATCCG
CAGAAGCTTG CCGATCTGTT GCAGGACCCG CGGCAGCTCA CGACGCAGCG CCATCTGCGC
AGGATCTACC GCGACCCGAT GACCGGGGAG GCCGACTGGG CGCTCGTCAC GGCGCCGTCG
GGCCGGATCA TCGGCGTCTA CAGCCATGCG TCGGGACGGC CGATCAAGCA GGGAAATTTC
CGCCACCGCG ACCGCGGTTT CGCCGGCAAG AACCACTATT CGGAATGGTG GTTCGTCTAC
ACGCCGGTCG AGCAGGCGAC GGAAGCCGAG GCGCCCGGCT AG
 
Protein sequence
MVSVAPARRR PGRPAQGGFT YIGLLVLIAL LGFSLAATGV VWSQAQQRQK ERELLFIGNQ 
FREAIGRYYR STPGPVKEYP QKLADLLQDP RQLTTQRHLR RIYRDPMTGE ADWALVTAPS
GRIIGVYSHA SGRPIKQGNF RHRDRGFAGK NHYSEWWFVY TPVEQATEAE APG