| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1289 |
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| Symbol | |
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| ID | 3673379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1357301 |
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| End bp | 1360807 |
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| Gene Length | 3507 bp |
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| Protein Length | 1168 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709974 |
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| Product | multi-sensor Signal transduction histidine kinase |
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| Protein accession | YP_315047 |
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| Protein GI | 74317307 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCCC GCGGCGCTGC CGGCACGTCG GGCGCCGCGC CCGGGTCCGC GCGCACGATC
CGACCCGCAG ACGCGCTTTA TCCGGGTGTC TTGTGCTTCA CTAGCGGTAT GAGGTGTCTG
CTGCTGGTCC GCTTCGTCAG TTCGTTCTGC CTGCTGCTCG GCGCGGCGGT GCTCTTTTTC
GCGCTCGCCG GCGCACCGCG CGACCTTGCC CCGCTTGTCG ACGCGGTGAG CCCGAAGAGT
GCGCTCATCA TTGTTTTCGC GGCGCTGACC CTGATCCTCG GCGAACTTGA CGCACGCTGG
GCGCGGCGCG TGCGCGTCGG CCTGGGCGCG GGAATCGTCG TGCTCGCCGC ACTCACGCTT
GTCCAGCAGG GCCTGCGTCT ATATCCCCAC CTGGCGGCCT GGCCCTGGGC GCTGCTTTTG
AGCCTCGACG TGGGGATCCC TGCCGGCGCC GAGACCTTCC GCGCCGTGAA CATGGCGACG
ACCGCAGCCC TCGGCTTTGC GCTCTTCGGC GTCGCACTGA TATTGCTCGA GCGGCTCGGA
CGCCCCGTGG TGCTGTGGAC CGTTCAGCTG CTGTGCGCGG TCTGCTTCAT GCTCGCGCTG
ATGGTCGTCA TGATCCACGT AATGGGCGTG TCCTTCGTGC TCGACGGTGA GGCGCCGGCC
GGTCGGGAAG CGGGCTGGCC CGCGGCGGCG GCGCTGCTGC TGTTGAGCGT CGGGCTTTAT
TTCGGCGTCA GCCGCCACGC GGAGGCCCGC GCGTACTACG CCCGCTACGA AGACCACAAG
ATCATCGGCG TGACGACCTT TCTGCTGCTC GTGACCGCAG TCGGTGCGGG GCTCGCCGGC
GCCGGCATCC TCTTGCGCCA GTCCTACGAG GTGTCGCAAC AGACGCTGAA GCAGACTCAG
GCAAGCAAGG CCATCCTGTT CCACGACACG CTCATCGCCG CGCAGAACCA GGCCTTGCGC
GTCGCGCGGC TGGTGGGCGA ACTCGAGGGC AGCCACCTCC GGTCGCTTTT CCTTGGCCTC
AACGATTCGC GCACGGCCAC TGACGGCGCG CAAAAGAACT ACGAACTGGC GGCGCTCGAG
ATCATCGAGC CCGACCTCGG CCGGACCGTG GCGCTCGGCG AGATCGGCGG CGAAACGGCT
CGCGTCGCGC TGCGCGAACC GGCGAACACC TGGCTCGTGC GGCGCGGCGC CTGGCTGCTC
GAAAGCCATA TCCCGATCGC GCGGGCCGGC GGCTTCACGG GCACGCTCGT CACCCACATC
CGCCTGCACC GCGTCGAGCA GCTGCTCGAG CAGGCGCGCG GTCTCGGGCA GACCGGCGCG
CTGGTCGTCT GCGCGCCGCG CGACGCGACG AGCATGCAAT GCCTGCCTTC CCGGCAAAAC
CCGCAGCACG GGCGCGTCAT GCTGCAGCGC GTCGGGCCGC CCTTGCCGAT GGCGCGCGCG
CTCGCCGGCG AAGAGGGCAT CGCCGTCGCT TACGACAACT TCGGCGTCAA CGTCATCTCC
GCCTACGGGC CGATCGGTTC GACCGGTCTC GGCATGGCAC AAAAAATCGC GACCGCCGAG
CTCTACGCGC CGCTGCGTGA ACGCCTTGGC CTGGTCGTCG CCAGCGTGCT CGGGCTCACG
CTCGTGGGGG CGGCGCTGCT CTGGCGTCTC GTTCACCCGC TGACCTCCCG GCTGCTCGAG
ACCCGGGCGT ATCTGCAGGG GCTGACGAAC AGTGTTCCGG AAGCGGTCAT CACGACCGAC
GAAGGCGGTG GGATCAAGAC GTGCAATCCG GCGACGACCG CGCTGTTCGG ATACCTCGAG
CCCGAGCTTC AGGCACGGAA AATCGGCGCG CTTTTCGCAC CGACGTCGGC GGTCGCCGAG
CGGGCGGACG AACTGATCGA CAGCAGCGGA AGGATGCGCA GCACCGGCAA GGTCGCGCTC
GAGCGCCTCG GCAGCCGGAA GGACGGGACG AGCTTCCCGG TCGAACTGAC CGTCACGCCA
TTCAACCTCG AGGGCAAACG GCGTTTCGTC GCGGTCGTGC GCGACGTGTC CGCGCGGCAG
GCGGCCGAAG AGGCCTTGCA CCGCAGCGAG GAGATGTTCC GCGCGCTGGT CGACAACGCC
CCGGACGTCA TCATCCGCAT CGACCGCGGG CACCGTCGGC TGTACGCCAA CCCCGCGTTC
GAGACGATCA CCGGCCTGGC GCGGCACGCC GTCATCGGCA AGACGCACGA GGAATCGGGC
ATGGCCGCGC TGGTGAGTCT CGATTGGTAC GGGACGGTCG ACGAAGTGTC CGAAACGGGG
CAGGACAAGG TCGTCGACTT CACACTGCAC GGCCCGGCCG GGCCCCGCTT TCTCCAGGTC
CGTTTCGTTC CCGAGCGGGC GCGCGACGGG TCCGTCCAGT CCGTCCTCGC GCTGGGCCGG
GACGTCACCG TGGCGAAACA GGCGGAGGCC GTCCTGCGCG AGAGCGAGAA CCGCCTGCGG
CGGATCACGG GCCACGTGCC CGGCATGGTT TTCCAACTCG TGAGCGCGCC GGGCGCGGAG
CCGACGTTCA GCTACGTCAG CGAAGGGGCG AGCGCGCTCT GCGGGCTGGC GAGCGAAACG
GTGCTGGCCG ACGCGCCACG CTTCCTGGAT CTGATTTTCG ACGAGGACCG GCCGCTGTTC
GAGCAGTCGA TGGCGCAGTC GGCGCGCGGG CTCTATCCGT GGAGTTGGGA AGGGCGGATA
CGCGCGGGGA GCCTCGGCGA AACCTGGGTC AGCCTGCGCG CTACGCCAAC GCTGCTGCTC
GACGGCGGCG TGGTCTGGGA TGGCATCATT CTCAACGTGA CCCAGACCAA GCTCAACGAA
CTCGAACTGC GGCAGTCGCG CGAATCCCTG CGGCTGCTGA CGGCTCACCG CGAGGCAGTG
CGCGAAGACG AGCGCAAGCA TATCGCGCGC GAGATCCACG ACGAACTCGG ACAATTGCTC
ACCGCGCTGC GCATGGAGGT TTCCGCGGTC GGCATGGCCT TCGGCCGCGA TAATCCGGAA
CTGGACGAGA AAGTGCGGTC GATGAAAACG GTCATCAACC AGACGATCCA GACGGTTCGC
CAAGTGGCGA CGTCCTTGCG CCCGGCCGCG CTCGACCTCG GGCTCGAGAC CGCGATCGAC
TGGCTGGCGA GCGAGTTCTG CAAGCGTAAC GCGGTCGAGT GCGCGGTCGC GATTCCGGGC
GAGATCGCGC TCGACGAAGT CCGCGCGACC GCGCTGTTCC GTATCCTGCA GGAAACGCTG
ACCAACATCG CGCGTCACGC CGGCGCGACC TCGGTCTCGA TAAAACTGAA AACGACCGGC
GAGGAGATCT GCTTGAAAGT CACCGACAAC GGCCGCGGCT TCGACCCCGA GGAAGCGAAG
CAGGGCGGCA GCTTCGGCTT GAAGGGAATC GCCGAACGCG TACTCATCCT CGGCGGAACG
ATGACGATAA AAAGCGCACC GGGGCAGGGG GCGGAACTCG CGGTCTGCAT CCCGGCCGCG
GACCCGGCAA GCGGAGGGGT GCAATGA
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| Protein sequence | MAARGAAGTS GAAPGSARTI RPADALYPGV LCFTSGMRCL LLVRFVSSFC LLLGAAVLFF
ALAGAPRDLA PLVDAVSPKS ALIIVFAALT LILGELDARW ARRVRVGLGA GIVVLAALTL
VQQGLRLYPH LAAWPWALLL SLDVGIPAGA ETFRAVNMAT TAALGFALFG VALILLERLG
RPVVLWTVQL LCAVCFMLAL MVVMIHVMGV SFVLDGEAPA GREAGWPAAA ALLLLSVGLY
FGVSRHAEAR AYYARYEDHK IIGVTTFLLL VTAVGAGLAG AGILLRQSYE VSQQTLKQTQ
ASKAILFHDT LIAAQNQALR VARLVGELEG SHLRSLFLGL NDSRTATDGA QKNYELAALE
IIEPDLGRTV ALGEIGGETA RVALREPANT WLVRRGAWLL ESHIPIARAG GFTGTLVTHI
RLHRVEQLLE QARGLGQTGA LVVCAPRDAT SMQCLPSRQN PQHGRVMLQR VGPPLPMARA
LAGEEGIAVA YDNFGVNVIS AYGPIGSTGL GMAQKIATAE LYAPLRERLG LVVASVLGLT
LVGAALLWRL VHPLTSRLLE TRAYLQGLTN SVPEAVITTD EGGGIKTCNP ATTALFGYLE
PELQARKIGA LFAPTSAVAE RADELIDSSG RMRSTGKVAL ERLGSRKDGT SFPVELTVTP
FNLEGKRRFV AVVRDVSARQ AAEEALHRSE EMFRALVDNA PDVIIRIDRG HRRLYANPAF
ETITGLARHA VIGKTHEESG MAALVSLDWY GTVDEVSETG QDKVVDFTLH GPAGPRFLQV
RFVPERARDG SVQSVLALGR DVTVAKQAEA VLRESENRLR RITGHVPGMV FQLVSAPGAE
PTFSYVSEGA SALCGLASET VLADAPRFLD LIFDEDRPLF EQSMAQSARG LYPWSWEGRI
RAGSLGETWV SLRATPTLLL DGGVVWDGII LNVTQTKLNE LELRQSRESL RLLTAHREAV
REDERKHIAR EIHDELGQLL TALRMEVSAV GMAFGRDNPE LDEKVRSMKT VINQTIQTVR
QVATSLRPAA LDLGLETAID WLASEFCKRN AVECAVAIPG EIALDEVRAT ALFRILQETL
TNIARHAGAT SVSIKLKTTG EEICLKVTDN GRGFDPEEAK QGGSFGLKGI AERVLILGGT
MTIKSAPGQG AELAVCIPAA DPASGGVQ
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