Gene Tbd_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1281 
Symbol 
ID3673371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1347466 
End bp1348752 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content67% 
IMG OID637709966 
Producthypothetical protein 
Protein accessionYP_315039 
Protein GI74317299 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTT CGCAGGCCGC AACGACACGA CGGGAAGACG CACGCGTCTT CTGGGCCGAC 
GCCTACCTTG CCGTGCGCCA GCGCAGCAAG GCGCTCTGCG CGCCGCTCGC CGCCGAGGAC
TACGTGATCC AGACCGCCCC CGAGGCGAGC CCCGCAAAAT GGCATCTCGC ACACGTGAGC
TGGTTCTTCG AGACCTTTCT GCTGCGCGAC TATCTTGCCG GTTACCGCGA CTTCCATCCG
CGCTTCGGCT ATCTCTTCAA TTCGTATTAC GAGCAGGTCG GCGAATTCCA TCCTCGTGCG
CACCGCGGCT TCCTGTCGCG TCCGAGCGTC GAGGAAATCC TTCGCTATCG TGCCCACGTC
GACGAAGCGA TGCTCAAACT CATGCAAGGC GCCGGCGGCG CCGTCTGGCC CGAAATCGAG
AAGCGCCTCG CGATCGGCCT CAATCACGAG CAACAGCATC AGGAACTGCT GTTGACCGAT
CTCAAGCTCA ATCTCTACGC CAATCCGCTG CGCCCGGCGT ACCGCGACGA CCTGCCCGCC
GTGCCCGGCG GGCTCGCGCC GGACCTCGGC TGGCAGTCTT TTCCGGGCGG CGTGCACGAG
ATGGGCGCGC GCGGCGACGG TTTCGCCTAC GACAACGAAA TGCCGCGCCA CCGCAGCTAT
GTCGAGCCCT TCCACCTGGC GACGCGCCTC GTCACCAACG GCGAGTATCT CGGTTTCATC
GACGACGGCG GCTACGTCAA TCCCGCGCTT TGGCTCGCCG ACGGCTGGGC CACGCTCAAG
CGTCTCGGCT GGAGCGGCCC GCTCTACTGG GAGCGGGTCG ACGGCGTGTG GCAGCAATAC
ACGCTCGGCG GCGTGCGCCG GCTCGACCCC GAGCAGCCGC TCTGTCACGT CAGCTACTAC
GAGGCGGAGG CCTACGCGAC CTGGGCCGGC AAGCGGCTGC CGACCGAAGT CGAATGGGAA
ATCGGTGCAG CGGGCCTTCC GGTGCGCGGC AATCTGCGCG ACGCCGGCCA CTTCCATCCC
GTCGTCGCGC CGACCGGCGG CGGCCTGCTG CAGATGTTCG GCGACGTCTG GGAGCACACG
GGCTCGGCCT ACCTGCCTTA TCCCGGCTTT CGCACCGCGC CCGGCGCCCT CGGCGAATAC
AACGGCAAGT TCATGTGCGG TCAGATGGTC CTGCGCGGCG GTTCGTGCGT GACCCCGGCC
GACCACATCC GCGCGAGCTA CCGCAACTTC TTCTATCCGC ACGAACGCTG GCAGTTCCAG
GGCATCCGGC TCGCCGACGA CGCGTAG
 
Protein sequence
MTASQAATTR REDARVFWAD AYLAVRQRSK ALCAPLAAED YVIQTAPEAS PAKWHLAHVS 
WFFETFLLRD YLAGYRDFHP RFGYLFNSYY EQVGEFHPRA HRGFLSRPSV EEILRYRAHV
DEAMLKLMQG AGGAVWPEIE KRLAIGLNHE QQHQELLLTD LKLNLYANPL RPAYRDDLPA
VPGGLAPDLG WQSFPGGVHE MGARGDGFAY DNEMPRHRSY VEPFHLATRL VTNGEYLGFI
DDGGYVNPAL WLADGWATLK RLGWSGPLYW ERVDGVWQQY TLGGVRRLDP EQPLCHVSYY
EAEAYATWAG KRLPTEVEWE IGAAGLPVRG NLRDAGHFHP VVAPTGGGLL QMFGDVWEHT
GSAYLPYPGF RTAPGALGEY NGKFMCGQMV LRGGSCVTPA DHIRASYRNF FYPHERWQFQ
GIRLADDA