Gene Tbd_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1260 
Symbol 
ID3673350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1321892 
End bp1323013 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content71% 
IMG OID637709945 
Producthypothetical protein 
Protein accessionYP_315018 
Protein GI74317278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.62411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCAC GCACCGGTCG AGCCGGATTC CTGCCGCTTG GCGAAATGCC CCGCCTGGTC 
GGCGAACTTA TGCGGCTCGG CTACGAATGC CTGGGGCCCA CGGTGGAAAA CGGCGCGATC
GCAATGCGCG GGCTCGCCAC CGCCGACGCC TTGCCGCGCG GCCTGAAGAC CGAGCAGGAG
AAGGGCACTT ATCGCGTCAC GCGCGATCCC GCCAATCGCT ATTTCGCCTG GGCCAATGGT
CCGCAGGGCA TCCGGCCGCA CGCATTCGCG AGCCGGGAAT CGCTGTGGCG CGTGGCGCGC
GACACGGGTG GCGCGCTCAG CTTCGAACCC GTCACCGTCG ACGCGCCGAA GCAGGCGCTG
ATCGGCGTGC GGGCCTGCGA TCTCGCGGCG CTCGCGATCC AGGACACGCA CTTCCTGCGC
GGCGGACGCG TCGACGCGCA CTACGCGGCG AGGCGCGCCG CGCTGTTTCT GGTCGCCGTC
CAATGCGCCG AGCCCGCTGC CACGTGCTTC TGCGCGTCGA CCGGCGACGG CCCGACGCCG
GTCACGGGTT ACGACCTTGC GCTCGCCGAG CTGGCCGAGG GGTTCGTCGT CGAGGCCGGG
AGCGAAAAAG GCCAGGCGGT TTTCGACGGA TTGAATCTGC CGCCGGCGAG TGACGCGCAG
CTTGCCTCGG TGCGGACGCA GGGCGAGGCT GCGGCCGCGG CACAGACGCG CAGCCTGCCC
GCCGCTGCGC TGCACGGCGC CTTGATGAGC CGGCTCGATC ATCCACGTTG GGACGACGTG
GCGGCCCGCT GCCTCGCGTG CACGAACTGC ACACTGGTCT GCCCGACCTG CTTCTGCCAC
GCCGAGGTCG ACGAGGTCGC GGTCGACGGC GACACGACCG AGCACGCGCG CGTATGGGAT
TCGTGCTTCG GCGAGGCGCA CGGGCACCTG CACGGCTTCA ACGTGCGTCC GGACGTGCGC
ACCCGCTACC GTCAGTGGCT GACCCACAAG CTCGATACCT GGCACGACCA GTTCGGGCGC
AGCGGCTGCG TCGGCTGCGG GCGCTGCATC GCGTGGTGCC CGGCCGGCAT CGACCTCACC
GAAGAATTCG CAGCCCTGAC CGCGGGCGAG GTGGCCGCTT GA
 
Protein sequence
MFPRTGRAGF LPLGEMPRLV GELMRLGYEC LGPTVENGAI AMRGLATADA LPRGLKTEQE 
KGTYRVTRDP ANRYFAWANG PQGIRPHAFA SRESLWRVAR DTGGALSFEP VTVDAPKQAL
IGVRACDLAA LAIQDTHFLR GGRVDAHYAA RRAALFLVAV QCAEPAATCF CASTGDGPTP
VTGYDLALAE LAEGFVVEAG SEKGQAVFDG LNLPPASDAQ LASVRTQGEA AAAAQTRSLP
AAALHGALMS RLDHPRWDDV AARCLACTNC TLVCPTCFCH AEVDEVAVDG DTTEHARVWD
SCFGEAHGHL HGFNVRPDVR TRYRQWLTHK LDTWHDQFGR SGCVGCGRCI AWCPAGIDLT
EEFAALTAGE VAA