Gene Tbd_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1256 
Symbol 
ID3673346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1318593 
End bp1319417 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content65% 
IMG OID637709941 
Productcondensin subunit ScpA 
Protein accessionYP_315014 
Protein GI74317274 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAG CCGAGCTGCT CGATCCGCCT CTCGAAACGC CGCCCCGGCC AGCGGTCAAG 
ATACGCGGCG AGCCGCTCGC CGAGTTGCCG CAGGATCTCT ACATCCCGCC CGACGCGCTC
GAGGTCTTTC TCGAAGCCTT CGAAGGTCCG CTCGACCTTC TGCTCTACCT GATCCGCAAG
CAGAACCTCG ACGTCCTCGA CATTCCGATG GCCGCGCTGA CCCAGCAGTA CATGGCCTAC
GTCGAGGCTG CGCGGGCGAC CCGGCTCGAA CTTGCGGCCG AATATCTACT GATGGCGGCG
GTGCTGATCG ACATCAAGTC GCGCATGCTG CTGCCGCGGC GCGAGCAGGC CGACGAGCCG
GGCGAGGCCG ACGATCCGCG CGCGGAACTG GTGCGGCGGC TGCTCGAATA CGAGCAGATG
AAGCGGGCCG GCCAGCAGCT CGACGCCTTG CCGCAGGCGG GGCGGGATTT CGATACGGTC
AGTGTTTTCC TGCCGGCCGC GGCCAAGCGG CTGCCGAGCG TGCACGCGGA AGAACTCGCC
GCGGCCTGGC TTGCGATCCT GTCGCGCGCG AAGAACCGCA CCCATCACCG CATCGGCCGC
CAGGAACTGT CGATCCGCGA GCACATGAGC CGCATCCTGA AACGGCTCAC GCCCGGAGAA
TTCATGGAAT TCAAGGAGCT GTTTCCGGAA GCTTCGACGG TGCATGAACT CGTGGTGACC
TTCCTCGCCG TCCTGGAACT GAGCAAGGAG ACGCTGCTCG ACGTGACGCA GGCCGAACCT
TTCGCCCCCA TCTACGTGAA GCTCCATGAA TCTGCAGCCG AGTGA
 
Protein sequence
MNEAELLDPP LETPPRPAVK IRGEPLAELP QDLYIPPDAL EVFLEAFEGP LDLLLYLIRK 
QNLDVLDIPM AALTQQYMAY VEAARATRLE LAAEYLLMAA VLIDIKSRML LPRREQADEP
GEADDPRAEL VRRLLEYEQM KRAGQQLDAL PQAGRDFDTV SVFLPAAAKR LPSVHAEELA
AAWLAILSRA KNRTHHRIGR QELSIREHMS RILKRLTPGE FMEFKELFPE ASTVHELVVT
FLAVLELSKE TLLDVTQAEP FAPIYVKLHE SAAE