| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1252 |
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| Symbol | |
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| ID | 3673342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1314391 |
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| End bp | 1316784 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637709937 |
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| Product | PIM1 peptidase |
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| Protein accession | YP_315010 |
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| Protein GI | 74317270 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATG ATTTCAGCGA CGCGACGCTC GAAGGCGAAG TCATTCCCGA CGACCGAAGC
CTGCCGGCGG CGCCCGTCCT GCCGCCCGAG CTCTATCTGC TGCCGCTGAC CGAGAAGCCG
TTCTTTCCGG CGCAGACGCT GCCGCTCCTG ATGAACGAGG CGCCCTGGCT GTCGACCGTC
GAAGCGATCG GCGAAACGCC GCAGCACATG GTCGGACTGG TCGTGGTCAA GCCGGACAAC
ACCGACGACG TCAAACGCGG CGACTTCCAG ACGGTCGGCA CCGCGGTGCG TATCCATCAT
CCGGTGCGCG CCGACGGCAA GATGCAATTC ATCGCCGAGG GCGTGCGCCG CTTTCGAGTG
GTCGAGTGGC TGTCGGACAC GGCGCCGTAC CGCGTCCGCG TCGACTATCC GAACGAGACC
GGCAAGCCGG AGTCCGAGGA AATCCGCGCG TACTCGATCG CGATCATCAA TACGATCAAG
GAGTTGCTGC CGCTCAATCC GCTGTACTCG GAGGAGCTCA AGTTCTTTCT CAATCGCTTC
GGCCCGAACG AACCCTCGCA GCTGACCGAT TTTGCCGCGA GCCTCACGAC CGCGTCCAAG
CTCGAACTGC AGGATGTGCT CGAGGCGTTC AGCCTGAAGA AGCGCATGGA GAAGGTGCTC
GTGCTGCTGA AGAAGGAGCT CGACGTCGCC CGGCTGCAGT CGCAGATCCG CGAGCGGGTC
GACGAGAAGA TGAGCGAGCA GCAGCGCGAA TTCTTCCTGC GCCAGCAGTT GAAGGCGATC
CAGAAGGAAC TGGGCATCGC GAAGGACGAC AAGACCGCCG AGCTCGACAC CTTCCGTGAG
CGGATCGCCA AACTCGCACT GCCCGAGCAG GCGAAAAAGC GCATCGACGA GGAAATGCAC
AAGCTCTCGA TGCTCGAAAC GGGCTCGGCC GAATACACGG TGACGCGCAA CTATCTCGAC
TGGCTGACCG TGCTGCCCTG GGGCGTCCAT ACCCAGGACA AGATCGACCT CGAACGCGCG
CGACGCATCC TCGACCGCGA CCACGACGGG CTCGACGACG TCAAGGATCG CATCATCGAA
TTCCTCGCCG TCGGCGCGAT GCGCGGCGAG ATGGCAGGCT CGATCCTGCT GCTGATAGGC
CCGCCCGGCG TCGGCAAGAC GTCGATCGGC AAGTCGGTCG CCGAGGCGCT CGGGCGCAAG
TTCTTCCGCT TCTCGGTCGG CGGCATGCGC GACGAGGCCG AGATCAAGGG CCATCGCCGC
ACCTATATCG GCGCGATGCC GGGCAAGTTC GTGCAGGCGC TGAAGGAGGC CGGCTCGGCC
AACCCGGTCA TCATGCTCGA CGAGGTCGAC AAGATCGGCG CGAGCTACCA GGGCGACCCG
GCGTCGGCGC TGCTCGAGGT GCTCGATCCC GAACAGAACG CCGACTTCCT CGACCACTAT
CTCGACGTGC GTTTCGACTT ATCCAAGGCG CTTTTCATCT GCACGGCGAA CGATTTTTCG
ATTCCCTCGG CGCTGCTCGA CCGCATGGAG GTCATCCGCC TTTCGGGCTA CATCACGGCG
GAAAAGATCG ACATCGCGAA GCACCATCTG TGGCCGCGCG TGCTCGAACG GGCGGGGCTC
AAGAAGAACC AGCTGACGAT CACCGAAAGC GCGCTGCGGC ACGTGATCGA AGGCTATGCC
CGCGAGGCCG GCGTGCGTAA CCTCGAAAAA CAACTCGGCC GGGTCGCGCG CAAGGCGGTC
GTCAAGATTC TCGGCGGCGC CGACACGCCG ATCAAGATCG GCGTGCGCGA GATCGAGGCC
TATCTCGACA AGCCGGTGTT CCTGCGCGAA CGGCCGCTGT CGGGGATCGG CGTGGTGACC
GGCCTCGCCT GGACCTCGAT GGGCGGCGCG ACGCTTCCGG TCGAGGCGAC ACGCGTCCAC
ACGCTCAACC GCGGCTTCAA GCTCACGGGC AAGCTCGGCG AAGTCATGCG CGAATCGGCC
GAGATCGCAT ACAGCTACGT CGCCTCGCAT CTCAAGGACT ACGGCGCCGA CCGCAGCTTC
TTCGACACGA GCTTCGTCCA CCTGCACGTG CCCGAAGGCG CGACGCCGAA GGACGGCCCG
AGCGCCGGCG TCACCATGGC GAGCGCGCTG CTGTCGCTGG CCAAGAACAC CAAGATCGCG
CGGCCCCTCG CGATGACCGG TGAACTCACG CTGACCGGGC AGGTGCTGCC GGTAGGCGGC
ATACGCGAGA AGGTCATCGC AGCGCGTCGC GTCGGCATCG GCGAACTGAT CCTGCCCGAA
GCCAACCGCC GCGATTTCGA CAAGCTGCCC GAGCACATCC GTGCGGGACT GACCGTGCAT
TTCGCCAAGC GTTATCGCGA CGTCGCCGAC GTCATCTTCG GGCCGCGTGC CTGA
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| Protein sequence | MANDFSDATL EGEVIPDDRS LPAAPVLPPE LYLLPLTEKP FFPAQTLPLL MNEAPWLSTV
EAIGETPQHM VGLVVVKPDN TDDVKRGDFQ TVGTAVRIHH PVRADGKMQF IAEGVRRFRV
VEWLSDTAPY RVRVDYPNET GKPESEEIRA YSIAIINTIK ELLPLNPLYS EELKFFLNRF
GPNEPSQLTD FAASLTTASK LELQDVLEAF SLKKRMEKVL VLLKKELDVA RLQSQIRERV
DEKMSEQQRE FFLRQQLKAI QKELGIAKDD KTAELDTFRE RIAKLALPEQ AKKRIDEEMH
KLSMLETGSA EYTVTRNYLD WLTVLPWGVH TQDKIDLERA RRILDRDHDG LDDVKDRIIE
FLAVGAMRGE MAGSILLLIG PPGVGKTSIG KSVAEALGRK FFRFSVGGMR DEAEIKGHRR
TYIGAMPGKF VQALKEAGSA NPVIMLDEVD KIGASYQGDP ASALLEVLDP EQNADFLDHY
LDVRFDLSKA LFICTANDFS IPSALLDRME VIRLSGYITA EKIDIAKHHL WPRVLERAGL
KKNQLTITES ALRHVIEGYA REAGVRNLEK QLGRVARKAV VKILGGADTP IKIGVREIEA
YLDKPVFLRE RPLSGIGVVT GLAWTSMGGA TLPVEATRVH TLNRGFKLTG KLGEVMRESA
EIAYSYVASH LKDYGADRSF FDTSFVHLHV PEGATPKDGP SAGVTMASAL LSLAKNTKIA
RPLAMTGELT LTGQVLPVGG IREKVIAARR VGIGELILPE ANRRDFDKLP EHIRAGLTVH
FAKRYRDVAD VIFGPRA
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