| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1249 |
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| Symbol | |
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| ID | 3673339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1311870 |
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| End bp | 1312610 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637709934 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_315007 |
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| Protein GI | 74317267 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.923056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACCG CAAGCGGCAA GACCGCGAAG AGCGAAAAAA ACGATCTGCT CGAGCAGTAC
ATGCCGATGG TCAAGCGGCT CGCGCACCAC ATGATGGGCC GGCTGCCGCC CAGCGTCGAG
GAGGACGATC TTGTCCAGGC CGGCATGATC GGCCTGCTCG ACGCCGTCAG CCGTTACGAC
GAGGCGCAGA GCGCGCAGTT CGAGGCCTAC GCGATCCAGC GCATCCGCGG TTCGATGATC
GACGAGTTGC GGCAGTCGGA CTGGATGCCG CGCAGCGCTC GGCAATCGAT GCGCAAGATC
GAGCAGGCCA TCGCCGCGCT GCAGCACCAG TTGGGGCGTC AGCCGAGCGA GGGCGAAATC
GCCGAGGCGA TGAAGATCCC GCTCGCCGAC TACCAGTCGA TGCTTGGCGA TGCGCGCGGC
CACCAGTTGC TTTACTTCGA GGATTTCGGC GAGTCCGACG AGGACGACTC CTTCCTCGAC
AAGCAGTCCG CCGACGAGGC GACTATGCCG CTGCCGCAGC TGCTCGACGC CAACCTCAGG
GCCTGCATCA TCGCCGGCAT CGAGAACCTG CCCGAGCGCG AGCAGCTCCT GATGTCGCTG
TATTACGAAC AGGAACTCAA CCTGCGCGAG ATCGCCGAGG TCTTCGGCGT CAGCGAGTCG
CGCATCTGCC AGCTGCACGG CCAGGCGATT GCGCGGCTGC GCGCCCGGCT CAAGGAAGAT
TCGTGGATCG CAGCAGCCTG A
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| Protein sequence | MYTASGKTAK SEKNDLLEQY MPMVKRLAHH MMGRLPPSVE EDDLVQAGMI GLLDAVSRYD
EAQSAQFEAY AIQRIRGSMI DELRQSDWMP RSARQSMRKI EQAIAALQHQ LGRQPSEGEI
AEAMKIPLAD YQSMLGDARG HQLLYFEDFG ESDEDDSFLD KQSADEATMP LPQLLDANLR
ACIIAGIENL PEREQLLMSL YYEQELNLRE IAEVFGVSES RICQLHGQAI ARLRARLKED
SWIAAA
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