| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1237 |
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| Symbol | |
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| ID | 3673327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1297664 |
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| End bp | 1299916 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637709922 |
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| Product | ATP-dependent Clp protease ATP-binding subunit ClpA |
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| Protein accession | YP_314995 |
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| Protein GI | 74317255 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.595006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCC AAGAACTTGA AGTCTCGCTG CACATGGCCT TCATGGATGC GCGGCAGAAG
CGCCACGAGT TCATTTCGGT GGAACATCTG CTGATGGCGA TGCTCGACAA CCCCTCCGCT
GCGGAAGTGT TGCGTGCCTG CGGCGCCAAC ATCGACACCA TGCGCGAGCA GCTCGGAAAA
TTCATCGACG AGCACACGCC GCGCGTCGGC GGCGACGGCG AAGTCGATAC CCAGCCCACG
CTCGGTTTCC AACGCGTGAT CCAGCGCGCG ATCCTGCACG TCCAGTCCTC GGGCAAGAAG
GAAGTGACCG GAGCGAACGT GCTCGTTGCG GTGTTCGGTG AAAAGGATTC GCACGCCGTC
TACTTCCTGA CCCAGCAGGG CGTCACGCGG CTCGATATCG TCAATTTCAT CTCCCACGGC
ATCACGAAGA CGCCGCAGAG CGAGCCGACC CGTCCGGAGG ACGCGACCGA GGCGAGCGCC
GAAGCCGTCT CCAACGCGCC GCTCGACAGT TTTGCGCAGA ACCTCAACGC CCAGGCGCTG
GCAGGCCGCA TCGACCCGCT GATCGGGCGC GATCCCGAAC TCGAGCGCGT CGTCCAGACT
CTGTGCCGCC GGCGCAAGAA CAATCCTCTG CTCGTTGGCG AGGCCGGCGT CGGCAAGACC
GCGATCGCGG AAGGCCTGGC GCGCCGTATC GTCGAAGGCA ACGTTCCCGA CATCCTCGCG
CAGAGCACGG TCTACGCCCT CGACATGGGT GCCTTGCTCG CCGGCACGAA ATACCGCGGT
GATTTCGAGC AGCGCTTGAA GGGCGTGCTG AAGCAGTTGG CGGACAATCC GAAGGCGATC
CTGTTCATCG ACGAAATTCA TACCCTGATC GGCGCCGGCG CCGCGTCCGG CGGCACGCTC
GACGCGTCCA ACCTGTTGAA GCCCGCGCTC TCGTCGGGGC AGCTCCGCTG CATCGGCGCG
ACGACCTATA CCGAATACCG CGGGATCTTC GAGAAGGACC ACGCGCTGTC GCGGCGCTTC
CAGAAGGTCG ACGTCCCCGA GCCGTCGGTC AACGAGACGG TCGCAATCCT GCGTGGTCTC
AAGTCGCGCT TCGAGGACCA CCATGGCGTC AAATACACCG CGGCGGCCTT GAGCACGGCG
GCGCAACTGG CGGCACGCTA CATCAACGAC CGCCATCTGC CCGACAAGGC GATCGACGTG
ATCGACGAGG CCGGCGCGGC GCAGCGGATT CTGCCGAAGT CGAAGCAGCG CCGCGTGATC
ACGCCACGCG AGATCGAAGA GATCATTTCC AAGATTGCGC GCATCCCGCC GAAGACCGTG
TCGTCGGACG ACAAGAATTC GTTGAAGACG CTCGATCGCG ACCTCAAGGC AGTCGTCTAT
GGCCAGGACG CGGCGATCGA CGCGCTGTCG ACCGCGATCA AGATGTCGCG CAGCGGCCTG
GGCAATCCGC AGAAGCCGAT CGGCAACTTC CTGTTCTCCG GCCCGACCGG TGTCGGCAAG
ACCGAAGTGG CCCGCCAGCT CGCTTATGTG CTCGGCGTCG AGCTGATCCG CTTCGACATG
TCCGAATACA TGGAACGGCA CGCCGTCTCG CGCCTGATCG GCGCCCCGCC CGGCTACGTC
GGTTTCGACC AGGGCGGGCT GTTGACGGAA GCGGTGACGA AACATCCCTA CGCCGTTGTT
TTGCTGGATG AAGTCGAGAA GGCGCATCCG GATATCTTCA ACGTGCTCCT CCAGGTGATG
GATCACGGCA CCCTGACCGA CACCAACGGC CGCAAGGCGG ACTTCCGCAA CGTCGTGCTG
ATCATGACGA CGAACGCCGG CGCAGAGATG CTGAACAAGG CGACCATCGG CTTTGCGGGC
GCGCGCGAAA GCGGCGACGA GATGGGCGAG ATCAAGCGCA TGTTCACGCC CGAATTCCGC
AACCGCCTCG ACGCGATCAT TCCGTTCGCG CCCTTGAGCG AGCCGGTCAT CCTCCAGGTC
GTCGAGAAGT TCCTGATGCA GCTCGAGGAG CAGCTGCACG AGAAGAAGGT CGAGGCGGTC
TTCACGGACG CGCTCAAGGC CTATCTGGCG AAGCATGGCT TCGATCCATC GATGGGCGCG
CGGCCGATGG CACGCCTGAT CCAGGACACG ATCCGCAAGG CGCTCGCCGA TGAGCTGCTG
TTCGGCCGAC TCGCGACCGG TGGACGCGTC ACGATCGACG TCGGCGCCGA CGACCGGGTC
GCGCTCGAGT TCGAGGAGGC CGTGCCAGCT TAG
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| Protein sequence | MIAQELEVSL HMAFMDARQK RHEFISVEHL LMAMLDNPSA AEVLRACGAN IDTMREQLGK
FIDEHTPRVG GDGEVDTQPT LGFQRVIQRA ILHVQSSGKK EVTGANVLVA VFGEKDSHAV
YFLTQQGVTR LDIVNFISHG ITKTPQSEPT RPEDATEASA EAVSNAPLDS FAQNLNAQAL
AGRIDPLIGR DPELERVVQT LCRRRKNNPL LVGEAGVGKT AIAEGLARRI VEGNVPDILA
QSTVYALDMG ALLAGTKYRG DFEQRLKGVL KQLADNPKAI LFIDEIHTLI GAGAASGGTL
DASNLLKPAL SSGQLRCIGA TTYTEYRGIF EKDHALSRRF QKVDVPEPSV NETVAILRGL
KSRFEDHHGV KYTAAALSTA AQLAARYIND RHLPDKAIDV IDEAGAAQRI LPKSKQRRVI
TPREIEEIIS KIARIPPKTV SSDDKNSLKT LDRDLKAVVY GQDAAIDALS TAIKMSRSGL
GNPQKPIGNF LFSGPTGVGK TEVARQLAYV LGVELIRFDM SEYMERHAVS RLIGAPPGYV
GFDQGGLLTE AVTKHPYAVV LLDEVEKAHP DIFNVLLQVM DHGTLTDTNG RKADFRNVVL
IMTTNAGAEM LNKATIGFAG ARESGDEMGE IKRMFTPEFR NRLDAIIPFA PLSEPVILQV
VEKFLMQLEE QLHEKKVEAV FTDALKAYLA KHGFDPSMGA RPMARLIQDT IRKALADELL
FGRLATGGRV TIDVGADDRV ALEFEEAVPA
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