| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1230 |
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| Symbol | |
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| ID | 3673319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1288506 |
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| End bp | 1289918 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709914 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_314988 |
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| Protein GI | 74317248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCC TCAAGACAAA GGGAGCGGCC GGGAAATTCG CTTCGTTGCT GCTGGTGCTC
GCGCTGAGCG CCTGCAGCCG GCCCGCGCCG CCGCCGGAAA CGAGCGGCGA ATTGCGCGTC
GGGACACGCA ACAGTCCGGC CACCTTTTAC ATCGGCCACG ACGGCGAAAC CGCGGGATTC
GAACACGACC TCATCCTCGC ATTCAGCCGC GCACAAAACT GGACGCTCAG TTGGACCGAA
AAGTCCCGGC CACAGGCGCT GTTCGACATG CTCGAGCGGC GCGAAATCCA TCTCGCGGCG
GCTGCGCTGC CGCAGGCCGT GGTCAAGGAC CGCCACCTGA TCTCCGGTCC GATCCTGTTC
GAGACCCCAG TCCACGTCGT CTATCGCACA GCCGATCGCG CGCCGCGCGG CGTCGCCGGA
CTCGCCGGAA AAAAACTCGC ATTCATCATC GGCTCCGGGC ACGGCCCGAT GCTCATGCGG
CTGAAACGCA AGCACCCGGA ACTCAGCTGG GCCGCGGTGG AGAACGTCTG GCCCGAGGAA
TTGCTCGCGC AACTGCAGGC GGGCAAGTAC GACGCGGTGA TCATCAACGG CATGGATTTC
GACGCGATGC GCAACTTCTA TCCCGGCCTC GCCGTCGCCT TCGATCTGCC GTACAAGCAA
AAAATCGTCT GGGCGCTGTC GCCCGGCAGT TCGCACGCCT TTCGCAACGC GCTCGCACGC
TTCGTCGAAC GCGCGCGCTC GGACGGCACG ATCAAGCGCG CGCTGGAACG CTACTTCGGG
CACGTCAAGC GCCTGGGCAG CAGCGACATT CTCGGCATCC TGCAACGCCG CCCGCAACGC
CTTCCAGACC TGCGCGAGCA TTTCCAGGAA GCGCAGACGC TGAGCGGAAT CGACTGGCGT
CTGCTCGCCG CGATCGGCTA CCAGGAATCG CAGTGGAACC GTCTGGCGAC CTCGCCAACC
GGCGTGCGCG GCGTGATGAT GCTGACCGGC GAGACGGCGG ACCGCATGGG GGTCAGCGAC
CGCCTCAACG CGCGCGAGAG CATCCTCGGC GGCGCACGCT ATCTGGCGCT GTTGAAGGAC
GCGCTTCCCG CACGCATCGC CGAGCCGGAT CGCACTTGGC TCGCGCTCGC TGCCTACAAC
CAGGGTCAGG GCCACCTCGA GGACGCGCGG CGGATCGCGC AGGCACGCGG CGGCGACCCG
AACAGCTGGG CGGACGTCAA GGAGGCGCTG CCCTACCTGA GCCGCGGCAG CTACGCGAAG
GTCATGAAAT ACGGCTATGC GCGCGGCGGC GAAGCGCTGC GCTTCGCCGA GAACATCCGC
AACTACTACG ACATCCTGCT GCGGCTCGAG CCCGAATACG ATCCCTTGAT CAATCTCGGG
CGAGGCGAAG ACGGCCTGCC ACCGCCGGGC TGA
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| Protein sequence | MPSLKTKGAA GKFASLLLVL ALSACSRPAP PPETSGELRV GTRNSPATFY IGHDGETAGF
EHDLILAFSR AQNWTLSWTE KSRPQALFDM LERREIHLAA AALPQAVVKD RHLISGPILF
ETPVHVVYRT ADRAPRGVAG LAGKKLAFII GSGHGPMLMR LKRKHPELSW AAVENVWPEE
LLAQLQAGKY DAVIINGMDF DAMRNFYPGL AVAFDLPYKQ KIVWALSPGS SHAFRNALAR
FVERARSDGT IKRALERYFG HVKRLGSSDI LGILQRRPQR LPDLREHFQE AQTLSGIDWR
LLAAIGYQES QWNRLATSPT GVRGVMMLTG ETADRMGVSD RLNARESILG GARYLALLKD
ALPARIAEPD RTWLALAAYN QGQGHLEDAR RIAQARGGDP NSWADVKEAL PYLSRGSYAK
VMKYGYARGG EALRFAENIR NYYDILLRLE PEYDPLINLG RGEDGLPPPG
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