Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1228 |
Symbol | |
ID | 3673317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1283647 |
End bp | 1287144 |
Gene Length | 3498 bp |
Protein Length | 1165 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637709912 |
Product | condensin subunit Smc |
Protein accession | YP_314986 |
Protein GI | 74317246 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.31729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCTTAA CCCACATCAA ACTCGCCGGT TTCAAGAGCT TCGTCGACCC CACCGTGATC CCCGTACCCG CCCAGCTCAC CGGCGTCGTC GGCCCGAACG GCTGCGGCAA GTCGAACGTG ATCGACGCCG TGCGCTGGGT GCTCGGCGAA TCGTCGGCCA AGCATCTGCG CGGCGAAACC ATGCAGGACG TGATCTTCAA CGGCTCGGGC AGCCGCAAGC CGGCGTCGCG CGCCTCGGTC GAGCTCGCGT TCAACAACGA CCTCGGCCGC GCGGCCGGGC AGTGGTCGCA GTACGCCGAG ATCGCGGTCA AGCGAGTCCT TGATCGCAGT GGCGACTCGA CCTACTACAT CAACAACATG CGGGTGCGGC GGCGCGACGT CGCCGACCTC TTCCTCGGTA CGGGCGTCGG TGCGCGCGCC TACGCGATCA TCGAGCAGGG CATGATCGCA CGCCTGATCG AGGCCAAGCC CGAGGAATTG CGCGGCTATC TCGAGGAAGC CGCGGGCGTG TCCAAATACA AGGAGCGCCG CAAGGAAACC GAGGCGCGCC TGAAGGACGC CCGCGACAAC CTCAATCGCG TCGAGGACAT TCGGCGCGAG CTCGGGCAAC AGGTCGAGAA GCTCGCCGCC CAGGCCGAGG TCGCGCAGCA TTACCGCAGC CTGCAGGCTG ACCTGACCTT CGCGCAGCAC CGGCTGTGGT TCGCGCGCAA GCACGACGCG GCGCAGCAGC GCGCGCGCAT CGACAAGGAT CTCGCCGAGG CGCAGAACAG GCTCGAAGCG GAAACGGCGC GGCTGCGCCA CATCGAATCG ACGCTCGAGA CCGCGCGCCA GAGCCAGTTC GCCGGACAGG ACACGCTCAA TACGGCGCAG GCGGCGTATT ACCAGGCGCA GTCCGAGGTC GCCCGCATCG AACAGACGAT GGCGCATCAG AACGCGACCC GCGAGCGGCT GTATCGCCAG GTGCAGGACT TGGGCGCGCG CGTGGAGACC CAGCAGGCGC GGCGCGCGAC GACCGGCGAC GCGCTGAGCG AGGTGACGGC GGAGCAGCCG GCGCTCGAAA TGGCCGTCGC CGAAGCCGAG GCCGCGGCGC GACAGGCGAC CGACAGCACG CTGCCGCAGA AGGAAGCCTT GCTGCGCGAA GCGCAGCAAG CGGTCGGCGA GGCGCAGCGC ACGGTGACGC AGCTCGACCA GTCGCGCCAG GTCGACGAGA ACAGCCTCGG TCACACCCGG CGCCAGATCG AACAACTCGA CGCGCGCCAG CGGCGCCTTG CCCAGGAACA CGCGCAACTG CCGCGCGCCG ATGCAGGCGG CCTCGCGACC AAACAGCTCG AGGTCGACGA ACTCGCGCAG ACGCTCGCCG AAGCACAGGC GAAGCTCAAG GACGCCGAAA CCGCGCTGCC CGAACTCGAC GCCGCGCGGG CGCGGCATAC GCGCGAACTC GAGGCCGCAC GCAAGGCCTT GCATCAGGCC GAAGCCGAGC TCGCCGCGTT GAAAAAGCTG CAGGAAAGCC TCAAGGCCGA CGAAAAGCTC GGCGCCTGGC TGGGCGCGCA TGGTCTCGGC GACGCGCCAC GCCTGTGGGA GAAGCTGCGG GTCGCGCCGG GATGGGAAGC CGCGGTCGAG GCCGTGCTGC GCGAACGACT GCAGGCGGTC GCGGCCGACG CGGCGGCAGC CTGGTTCGAC GACGTTCCGC CGGCGCGCCT GACGCTGTGG GCGGGGCACG GCGGGGACGC GGAGCCGGCG CCCGAGCTGC TCGCGAGCAA GATCACGAGC GACGACGCGG CCGCGCGGAT CGTGCTCGGC GACTGGCTCG CCGGCGTCTA CTGGGCCGAA GACGTCGACG CCGCGCGGGC GCGGCAGCCG AGCCTCGGAG CCGGCGAGCA TGTCGTGACC CCGCAAGGCC ATTTATTCAC ACGTCACAGC GTGACCTTCC ATGGCCCGCA CACGGCGGTC GAGGGGATAC TTGCGCGCGG GCGCGAACTC GAGCGCCTGG GCCAAGATTC CGCCCGGCTG CATGAGGAAG TGGCGGGACT CGAAGCGGCC TACGCCGAGA CGCAGCAGGC CTACGCGGAA CGCCAGCGCG AAGTCCAGGC CTTGCGCGCA CAGAGCGGGC AGGTGCAGGC GCGCCACCAT ACCGCGCAGA TGGAATTGCT CAGGCTGCAA CAGGCCGTCG AGCGGGTGCA GAGCCGCAGT ACCCAGATCA CCCGGGAGCT CGAGGACGTC GCCGGCCAGC AAGCGGCCGA GCACGCGGCG ATCGAAGCGC TCGAAACCCG TCTCAAGGAC TATCGCGCCC AAGGCGAGGT CGCGCGCGAG GCACTCTACG CCGCACGCCA GCAGCGCGAT CAGGCCGACC GCGCCGTGTT CGAGGCGCGC GAACTGCAGC GCGCTGCCGA ACGCCGCCAT CAGGAAGCGG GGTTCGCGCT GACCACCTGC AGCAACAAGA TCCGCGAACT CGGCGACGCG CTCGCGCGCA TCGATCAGGA GATCGCCGAC GACGAGACGC GGCTGGCGCA GGCGCGGGAA GAGCTCGCGC GCTTGCCGGC CGACGCGCTC GACGTCGAAC TGCAGGCCGC CCTGATGACG CGCACCGAGG CCGAGGCGGC GCTCGCCGCC GCGCGCGACG CGCTCGAGGG CCTAAGCGCG CAGCTGCGCA CGCACGACGA ATCGCGACTT GCGTGCGAGC AGGGGCTCGA TCCGCTACGC CGCACGATCG AGCAGTTGAA GCTCAAGGAT CAGGAAGCGA TGCTGACGCA GTCGCAGTTC GAACTGCAGC TGCGCGAGGC GGCGGCCGAC GAGGCGAGTC TCGAATCGGG GCTCGCCGAC AGCCCGCGGC CGAACCAGCT CCAGGCCGAG ATCAACCGTC TGCAGAACGA AATCGCCGCG CTCGGTGCGG TCAACCTCGC CGCGCTCGAG GAGCTGACCC AGGCCCAGGC GCGCGCCGAG TATCTCGCGG CGCAGTGCGC CGACCTCACC GAAGCGGTCA CGACGCTCGA GGATGCGATC CGCCGCATCG ATCAGGAGTC GCGCGCGCGC CTCAAGGAAA CCTTCGACAC GGTCAACCAG CACATGGGCG AACTGTTTCC CAAGCTCTTC GGCGGCGGCC AGGCGCGCCT GATATTGACC GGCGAGGAAC TGCTCGATTC GGGCGTGCAG GTGTTCGCGC AACCGCCCGG CAAGAAGAAC GCGTCGATCC ATCTGCTGTC GGGCGGCGAG AAGACGCTGA CCGCGCTGTC GCTGGTGTTC GCGATGTTCA AGCTCAACCC GGCGCCGTTC TGCCTGCTCG ACGAGGTCGA CGCGCCGCTC GACGACGCCA ACACCGACCG CTATTGCAAC CTCGTCAAGG CGATGTCCGA CCAGACGCAG TTCCTGTTCA TCACCCACAA TCGCGTGACG ATGGAAATGG CGCAACATCT GGCCGGCGTG ACCATGCAGG AGCCAGGCGT CTCGCGCATC GTCGCGGTAG ACGTCGACGA GGCGGTCGGC ATGGTCGAAG CGGCCTGA
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Protein sequence | MRLTHIKLAG FKSFVDPTVI PVPAQLTGVV GPNGCGKSNV IDAVRWVLGE SSAKHLRGET MQDVIFNGSG SRKPASRASV ELAFNNDLGR AAGQWSQYAE IAVKRVLDRS GDSTYYINNM RVRRRDVADL FLGTGVGARA YAIIEQGMIA RLIEAKPEEL RGYLEEAAGV SKYKERRKET EARLKDARDN LNRVEDIRRE LGQQVEKLAA QAEVAQHYRS LQADLTFAQH RLWFARKHDA AQQRARIDKD LAEAQNRLEA ETARLRHIES TLETARQSQF AGQDTLNTAQ AAYYQAQSEV ARIEQTMAHQ NATRERLYRQ VQDLGARVET QQARRATTGD ALSEVTAEQP ALEMAVAEAE AAARQATDST LPQKEALLRE AQQAVGEAQR TVTQLDQSRQ VDENSLGHTR RQIEQLDARQ RRLAQEHAQL PRADAGGLAT KQLEVDELAQ TLAEAQAKLK DAETALPELD AARARHTREL EAARKALHQA EAELAALKKL QESLKADEKL GAWLGAHGLG DAPRLWEKLR VAPGWEAAVE AVLRERLQAV AADAAAAWFD DVPPARLTLW AGHGGDAEPA PELLASKITS DDAAARIVLG DWLAGVYWAE DVDAARARQP SLGAGEHVVT PQGHLFTRHS VTFHGPHTAV EGILARGREL ERLGQDSARL HEEVAGLEAA YAETQQAYAE RQREVQALRA QSGQVQARHH TAQMELLRLQ QAVERVQSRS TQITRELEDV AGQQAAEHAA IEALETRLKD YRAQGEVARE ALYAARQQRD QADRAVFEAR ELQRAAERRH QEAGFALTTC SNKIRELGDA LARIDQEIAD DETRLAQARE ELARLPADAL DVELQAALMT RTEAEAALAA ARDALEGLSA QLRTHDESRL ACEQGLDPLR RTIEQLKLKD QEAMLTQSQF ELQLREAAAD EASLESGLAD SPRPNQLQAE INRLQNEIAA LGAVNLAALE ELTQAQARAE YLAAQCADLT EAVTTLEDAI RRIDQESRAR LKETFDTVNQ HMGELFPKLF GGGQARLILT GEELLDSGVQ VFAQPPGKKN ASIHLLSGGE KTLTALSLVF AMFKLNPAPF CLLDEVDAPL DDANTDRYCN LVKAMSDQTQ FLFITHNRVT MEMAQHLAGV TMQEPGVSRI VAVDVDEAVG MVEAA
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