| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1228 |
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| Symbol | |
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| ID | 3673317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1283647 |
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| End bp | 1287144 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637709912 |
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| Product | condensin subunit Smc |
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| Protein accession | YP_314986 |
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| Protein GI | 74317246 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.31729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCTTAA CCCACATCAA ACTCGCCGGT TTCAAGAGCT TCGTCGACCC CACCGTGATC
CCCGTACCCG CCCAGCTCAC CGGCGTCGTC GGCCCGAACG GCTGCGGCAA GTCGAACGTG
ATCGACGCCG TGCGCTGGGT GCTCGGCGAA TCGTCGGCCA AGCATCTGCG CGGCGAAACC
ATGCAGGACG TGATCTTCAA CGGCTCGGGC AGCCGCAAGC CGGCGTCGCG CGCCTCGGTC
GAGCTCGCGT TCAACAACGA CCTCGGCCGC GCGGCCGGGC AGTGGTCGCA GTACGCCGAG
ATCGCGGTCA AGCGAGTCCT TGATCGCAGT GGCGACTCGA CCTACTACAT CAACAACATG
CGGGTGCGGC GGCGCGACGT CGCCGACCTC TTCCTCGGTA CGGGCGTCGG TGCGCGCGCC
TACGCGATCA TCGAGCAGGG CATGATCGCA CGCCTGATCG AGGCCAAGCC CGAGGAATTG
CGCGGCTATC TCGAGGAAGC CGCGGGCGTG TCCAAATACA AGGAGCGCCG CAAGGAAACC
GAGGCGCGCC TGAAGGACGC CCGCGACAAC CTCAATCGCG TCGAGGACAT TCGGCGCGAG
CTCGGGCAAC AGGTCGAGAA GCTCGCCGCC CAGGCCGAGG TCGCGCAGCA TTACCGCAGC
CTGCAGGCTG ACCTGACCTT CGCGCAGCAC CGGCTGTGGT TCGCGCGCAA GCACGACGCG
GCGCAGCAGC GCGCGCGCAT CGACAAGGAT CTCGCCGAGG CGCAGAACAG GCTCGAAGCG
GAAACGGCGC GGCTGCGCCA CATCGAATCG ACGCTCGAGA CCGCGCGCCA GAGCCAGTTC
GCCGGACAGG ACACGCTCAA TACGGCGCAG GCGGCGTATT ACCAGGCGCA GTCCGAGGTC
GCCCGCATCG AACAGACGAT GGCGCATCAG AACGCGACCC GCGAGCGGCT GTATCGCCAG
GTGCAGGACT TGGGCGCGCG CGTGGAGACC CAGCAGGCGC GGCGCGCGAC GACCGGCGAC
GCGCTGAGCG AGGTGACGGC GGAGCAGCCG GCGCTCGAAA TGGCCGTCGC CGAAGCCGAG
GCCGCGGCGC GACAGGCGAC CGACAGCACG CTGCCGCAGA AGGAAGCCTT GCTGCGCGAA
GCGCAGCAAG CGGTCGGCGA GGCGCAGCGC ACGGTGACGC AGCTCGACCA GTCGCGCCAG
GTCGACGAGA ACAGCCTCGG TCACACCCGG CGCCAGATCG AACAACTCGA CGCGCGCCAG
CGGCGCCTTG CCCAGGAACA CGCGCAACTG CCGCGCGCCG ATGCAGGCGG CCTCGCGACC
AAACAGCTCG AGGTCGACGA ACTCGCGCAG ACGCTCGCCG AAGCACAGGC GAAGCTCAAG
GACGCCGAAA CCGCGCTGCC CGAACTCGAC GCCGCGCGGG CGCGGCATAC GCGCGAACTC
GAGGCCGCAC GCAAGGCCTT GCATCAGGCC GAAGCCGAGC TCGCCGCGTT GAAAAAGCTG
CAGGAAAGCC TCAAGGCCGA CGAAAAGCTC GGCGCCTGGC TGGGCGCGCA TGGTCTCGGC
GACGCGCCAC GCCTGTGGGA GAAGCTGCGG GTCGCGCCGG GATGGGAAGC CGCGGTCGAG
GCCGTGCTGC GCGAACGACT GCAGGCGGTC GCGGCCGACG CGGCGGCAGC CTGGTTCGAC
GACGTTCCGC CGGCGCGCCT GACGCTGTGG GCGGGGCACG GCGGGGACGC GGAGCCGGCG
CCCGAGCTGC TCGCGAGCAA GATCACGAGC GACGACGCGG CCGCGCGGAT CGTGCTCGGC
GACTGGCTCG CCGGCGTCTA CTGGGCCGAA GACGTCGACG CCGCGCGGGC GCGGCAGCCG
AGCCTCGGAG CCGGCGAGCA TGTCGTGACC CCGCAAGGCC ATTTATTCAC ACGTCACAGC
GTGACCTTCC ATGGCCCGCA CACGGCGGTC GAGGGGATAC TTGCGCGCGG GCGCGAACTC
GAGCGCCTGG GCCAAGATTC CGCCCGGCTG CATGAGGAAG TGGCGGGACT CGAAGCGGCC
TACGCCGAGA CGCAGCAGGC CTACGCGGAA CGCCAGCGCG AAGTCCAGGC CTTGCGCGCA
CAGAGCGGGC AGGTGCAGGC GCGCCACCAT ACCGCGCAGA TGGAATTGCT CAGGCTGCAA
CAGGCCGTCG AGCGGGTGCA GAGCCGCAGT ACCCAGATCA CCCGGGAGCT CGAGGACGTC
GCCGGCCAGC AAGCGGCCGA GCACGCGGCG ATCGAAGCGC TCGAAACCCG TCTCAAGGAC
TATCGCGCCC AAGGCGAGGT CGCGCGCGAG GCACTCTACG CCGCACGCCA GCAGCGCGAT
CAGGCCGACC GCGCCGTGTT CGAGGCGCGC GAACTGCAGC GCGCTGCCGA ACGCCGCCAT
CAGGAAGCGG GGTTCGCGCT GACCACCTGC AGCAACAAGA TCCGCGAACT CGGCGACGCG
CTCGCGCGCA TCGATCAGGA GATCGCCGAC GACGAGACGC GGCTGGCGCA GGCGCGGGAA
GAGCTCGCGC GCTTGCCGGC CGACGCGCTC GACGTCGAAC TGCAGGCCGC CCTGATGACG
CGCACCGAGG CCGAGGCGGC GCTCGCCGCC GCGCGCGACG CGCTCGAGGG CCTAAGCGCG
CAGCTGCGCA CGCACGACGA ATCGCGACTT GCGTGCGAGC AGGGGCTCGA TCCGCTACGC
CGCACGATCG AGCAGTTGAA GCTCAAGGAT CAGGAAGCGA TGCTGACGCA GTCGCAGTTC
GAACTGCAGC TGCGCGAGGC GGCGGCCGAC GAGGCGAGTC TCGAATCGGG GCTCGCCGAC
AGCCCGCGGC CGAACCAGCT CCAGGCCGAG ATCAACCGTC TGCAGAACGA AATCGCCGCG
CTCGGTGCGG TCAACCTCGC CGCGCTCGAG GAGCTGACCC AGGCCCAGGC GCGCGCCGAG
TATCTCGCGG CGCAGTGCGC CGACCTCACC GAAGCGGTCA CGACGCTCGA GGATGCGATC
CGCCGCATCG ATCAGGAGTC GCGCGCGCGC CTCAAGGAAA CCTTCGACAC GGTCAACCAG
CACATGGGCG AACTGTTTCC CAAGCTCTTC GGCGGCGGCC AGGCGCGCCT GATATTGACC
GGCGAGGAAC TGCTCGATTC GGGCGTGCAG GTGTTCGCGC AACCGCCCGG CAAGAAGAAC
GCGTCGATCC ATCTGCTGTC GGGCGGCGAG AAGACGCTGA CCGCGCTGTC GCTGGTGTTC
GCGATGTTCA AGCTCAACCC GGCGCCGTTC TGCCTGCTCG ACGAGGTCGA CGCGCCGCTC
GACGACGCCA ACACCGACCG CTATTGCAAC CTCGTCAAGG CGATGTCCGA CCAGACGCAG
TTCCTGTTCA TCACCCACAA TCGCGTGACG ATGGAAATGG CGCAACATCT GGCCGGCGTG
ACCATGCAGG AGCCAGGCGT CTCGCGCATC GTCGCGGTAG ACGTCGACGA GGCGGTCGGC
ATGGTCGAAG CGGCCTGA
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| Protein sequence | MRLTHIKLAG FKSFVDPTVI PVPAQLTGVV GPNGCGKSNV IDAVRWVLGE SSAKHLRGET
MQDVIFNGSG SRKPASRASV ELAFNNDLGR AAGQWSQYAE IAVKRVLDRS GDSTYYINNM
RVRRRDVADL FLGTGVGARA YAIIEQGMIA RLIEAKPEEL RGYLEEAAGV SKYKERRKET
EARLKDARDN LNRVEDIRRE LGQQVEKLAA QAEVAQHYRS LQADLTFAQH RLWFARKHDA
AQQRARIDKD LAEAQNRLEA ETARLRHIES TLETARQSQF AGQDTLNTAQ AAYYQAQSEV
ARIEQTMAHQ NATRERLYRQ VQDLGARVET QQARRATTGD ALSEVTAEQP ALEMAVAEAE
AAARQATDST LPQKEALLRE AQQAVGEAQR TVTQLDQSRQ VDENSLGHTR RQIEQLDARQ
RRLAQEHAQL PRADAGGLAT KQLEVDELAQ TLAEAQAKLK DAETALPELD AARARHTREL
EAARKALHQA EAELAALKKL QESLKADEKL GAWLGAHGLG DAPRLWEKLR VAPGWEAAVE
AVLRERLQAV AADAAAAWFD DVPPARLTLW AGHGGDAEPA PELLASKITS DDAAARIVLG
DWLAGVYWAE DVDAARARQP SLGAGEHVVT PQGHLFTRHS VTFHGPHTAV EGILARGREL
ERLGQDSARL HEEVAGLEAA YAETQQAYAE RQREVQALRA QSGQVQARHH TAQMELLRLQ
QAVERVQSRS TQITRELEDV AGQQAAEHAA IEALETRLKD YRAQGEVARE ALYAARQQRD
QADRAVFEAR ELQRAAERRH QEAGFALTTC SNKIRELGDA LARIDQEIAD DETRLAQARE
ELARLPADAL DVELQAALMT RTEAEAALAA ARDALEGLSA QLRTHDESRL ACEQGLDPLR
RTIEQLKLKD QEAMLTQSQF ELQLREAAAD EASLESGLAD SPRPNQLQAE INRLQNEIAA
LGAVNLAALE ELTQAQARAE YLAAQCADLT EAVTTLEDAI RRIDQESRAR LKETFDTVNQ
HMGELFPKLF GGGQARLILT GEELLDSGVQ VFAQPPGKKN ASIHLLSGGE KTLTALSLVF
AMFKLNPAPF CLLDEVDAPL DDANTDRYCN LVKAMSDQTQ FLFITHNRVT MEMAQHLAGV
TMQEPGVSRI VAVDVDEAVG MVEAA
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