| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1224 |
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| Symbol | |
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| ID | 3673313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1277362 |
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| End bp | 1281234 |
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| Gene Length | 3873 bp |
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| Protein Length | 1290 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709908 |
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| Product | hypothetical protein |
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| Protein accession | YP_314982 |
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| Protein GI | 74317242 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.867715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTAA CAACCGACCC GACCGACCTG CTGGTCTCCG AAGCCCAGCT CGTGCCGCTG
GCCGAGGTGC TCAACCTGCC GCCCGACCGC CTGCTGGGCG TCGATGCCGA TGCGCTCGCG
GCGCTCGGCA CGCTCGGCAT CCGGACGATC TTCGATCTTG CCATGTCGAG CGTCTTCGAT
GCCGCGGTCG AGATCGAGCG CGCCGCCGAC GACCCCGCCA ACGCGATGAA CCGCTTCGGC
CGCCCCGTCT CCGATCTTCT CAAACCGGGA ATCGCCGACA GCATCGCGGT CGCCGATCTG
CGCAACGAAT CGATCGACAT CCTCGCCGAC ATCGCCGACG CAGCCGCGGT GCAGAACGCG
CTCGGCGTTG TCACCGTGCG CGATCTGTCG GTCTATCCGC CGTTTCGCGC CGCGCGCGAA
ATCCTCAACC GCGCGTTCTT TCCCGAACAG CTCGAGGCCT TCGACCCAGA GAGCCCGGCG
GACCTGGTGC CGAAGTCGGG CGAGTTCCCG ACCGAGCGCG TGCAATACAC CTCGCTCGTG
CTCGACGAAA TCCTGCGCCC CGACAACGCG CCGCCGCTGA TCGACATCTC GAGTCCGCAG
TTCACGCCGA TCGACGCGAC GCGCGTGACC GACGCCGACT TCGGCTTCAG CACGCTCGGG
CTCGGCATGC TGCTGACGCT GAATCAGTCG TGGTTCATGC AGGGCGTCAC GCTCGGCCAT
CTGCTGCACA GCATGGCGCT CGCCGCGGGC GAGAGCACAC GCCTCGCGGT CGTCGACTGG
TCCAGAAAAG AGAGCGCCGG GCAAACCGAG GTCTTGGGCG AGACCGAGGA ACTCGCTCAG
GACACTTCCC GCAACCGCAG CATCAGCGAA GTCACGCAGG CGGTCGCGCG CGAAGCGCAG
AGCGGGTTCT CGCATACCGA AAGTCAGTCG ACGACCAAGC AGGTCGGCGC ATCCGCGGGC
ATCTCGATCG GCCCCTTCGG CGGCGGGGTG AGCGCGAGTC TCTCCAAGAC GTCGACCTCG
GCCGACAGCT ATGCGACGAG CGCGGGCAGC CGCGAAGTCG GCGCGTCGAT GCTGCAAAAC
GCCAGCGACC GCACGCATCA GCACGCGCAC GCATCACGCA CGCGACGCGC GTCGGTGGTG
CGCGAAGTCA GCCAGACCGA GCACGAGGCC GTGTCGACGC GCGTCATCAC GAACTACAAC
CACATGCACG CGCTGACCGT GCAGTACTAC GAGGTGCTGC AGATCTACCG CACCGAGATC
GCGCTCACGC GCTGCGACCG CGTCGTCTTC GTGCCCTTCC GCCTGATCGA CTTCGCCAAC
GTCGACCTGC TGCGGCGCTT CCGCGCGGCG CTCATCGACG CGGCGCTGAC CCCCGCCGTG
CGCGACGCGC TCGTGAACTT CGACATGCTC GAACTCGTTC CCGAGCGCCG CGTGGTGTTT
CCGGGACTCG GCGGTTCGAT CGCCGAGGTG CTCGAGAATC CGCGCGTCCT GATCCGTCCC
GCGCGGCTCG CGCGCCGCCG CCGCCCGCCC GGCGAGGAAG AACCCGTTCC CGAAGGCGAA
CCGCCCGAGC CCCCGGAGCC GGAGGAGGAA CCTCCGACGC GGCCGCCCCG CCCCGGCCGT
CCCGACGACG TCGCCGGCAC GCTATGGGAA TCCGCGGCTT CCAAGCTCTC GTCCTTCTTC
GGCACGCCGA GCGTACGCCG CAACTCGCAG TCGCTGTTCG TGCCGTCCGA CGTGCAGATC
GAGGAAGGCG CGGTGCAGAG CACGATGCGC ACGATCAAGC TCGTCTTCGT GCTGCGTGAC
GGCACGCGCA TCGTCGACCT GTCTGCGAGC GTCGCCCTCA GCGAGGTCGA CCGCATCGCC
CTGCAAGGCA GCAATCCGGC AGCGGACACG CCGGCGACGG CCGTGCTCGC GCTGTCGCGC
AACGGCGTCG TGTTCCCGCT CGAACTGCCG ACCGTGACGG TCGAAAAAGG CGCGCAGGAA
ACCAAGCTCA TCGACGTGCG CGCCGCGGGC GCCGACGTCA ATCTGGTGCA GCACCTGATG
GACAACCGCC TGCACTACAG CCAGGCCGTG TTCCGCAGCC TCGACCCGGC GATGATCGCA
GGTCTGCTGG CGCCATTCAG CATCACGCTC AATGGCCGAA ACTTCCCGCT GGTCCAGGTT
GCGGAGCCGA TTCCGCTGCG CATCGTCGGC AACGCGCTCG CGTTCAAGAT CAACACCGAC
CCGGTCAACG ACCAGGAATG GCGCGATTTC ATGGCCAGCC GCGGCCTCGT GATCGGCCAG
TCCAAGGTCG ACATCGTGCC GCTTTCGAGC GGGGGCATCT TCGCCGAGGC CGTGCTCGGC
CGCTTCAACT GCGCCGAGAA GCTCGACATG TCGCGCTTCT TCAACTGGCA GGATTCGCCG
ATTCCGATCC AGCCATCGGA GATCGCGGCG ATACAGACCG GCAGCCGCGC GCGCGACGTG
AACCTCACCC CCGGCCAGTT CAGCCAGCCG CTCGTCAGCA TCAGCCAGCC GGCGGCGCTG
CCCGACCCGA CGGGACTCGC GGGCACGCTC GCTGCGATCC AGAACGGCGC GATGTTCCGC
GACATGAGCG GTCTCGCCGA CACGATCAAG CTCGCGACCG AAACCGCCAA GCTATCCGCG
GCGGGCGCGA CCGCGGTCGG GCAACAGGCC GGCGAAGCGA TGAAGACCTC GGTCAGCGCC
GACACCGAGC GGCGCAAGAT CGCGGCCGAC CTCGAAAAAG CCAAGGTGCA GGCGGCGACC
GATCTGGCCA AGGCGAAGCT CGGCAAGTCG ATCCAGGACA AGAACATCAC CGAGGCCGGC
GCCGTCGTCA ACAAGGAAGA GGAACTCAAG AAGAAGCAGC AGGAACAAGC CAAGGCCGCC
GGCGGCAAGG CGCCCGCGGG CGGGGGCACG AGCGGCGGTG GCGGAACAAG CGGGGGAACA
AGCGGCGGCG GGACGAGCGG CAGCTCGGGA AGCGGCGGCG GAGGCGGCTC CTCAGGCCCG
GCCGCGCCGC GCTCGACGGG CAACTCGGCG CTCGACCGCA TCATCGGCAA CGACGAATCC
CTGCGTTCGT TCATCGGCCT TGCGCCCGAC TCGCCGGTGC CGACGCCCGC GGTCACCGAC
GAAGGCGTAC CGCTGCAGGA CTGGGACTTT ATCGGCGGCG GCTACGCTCT TTTCTACCAG
GAAACCAATG CTGGGCCGCG GGAGCTCGCC GCCGGGGCGC AAATCGAAGA GATCATCGCG
GCCGATTCCT GGACCCCGAC GAAAGCAGAG GACTTCCGAT CCTTGCTGCT CGGCGACCGG
AAGGTGCTCG CCGCTGATTT CGGGGATTTG CTGTTTGCCT TGGCTTTGCT GCCGGCGGGC
AGCATGCGCG CGCTCAACAT TGTGGCCTAC GCCAAAAATA ATCGGTCGCT GGCCCTTACC
CGGGAGTTCA TTTACACCAA GTCCGACGAA TCGTTCACGA TCCGTGACGC CGAGCCAACG
ACGCTGTCGG CGCTCGATCT TCAGAAGCTG ATTTCACTCA ACGGCGGAGC GCCAATCAGC
ACAAGCGACG GGGATGTCAA GCTGGCCGAT GTGCGCAAAG CCTTTGCAGT GGACGGCGAG
GTGCGTATTT TCAATCTGGA GACCCCACTG TCGCCGGAAT ACGTGCAAGC GATGGCCAAT
TTCTTTCAGG TGCGAGCCAC CGGTTTTGTG AAGAAGCAGG TGCGCGTTGC AGCCGAAGTC
ATCGCCACAA CAGAAAATGG AGAGCCCGTC CTCGACAAGA AGGCGTCGCT GCAGGGGGAT
CCGGCCGGCC AGACCGTGGA TGTCCTTGTG AATCTGCTGG AGCAGGACCG TGCGCAGAGC
GGCCTCTTCA CGGCTTTCCC GCGCCGCGGC TGA
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| Protein sequence | MPLTTDPTDL LVSEAQLVPL AEVLNLPPDR LLGVDADALA ALGTLGIRTI FDLAMSSVFD
AAVEIERAAD DPANAMNRFG RPVSDLLKPG IADSIAVADL RNESIDILAD IADAAAVQNA
LGVVTVRDLS VYPPFRAARE ILNRAFFPEQ LEAFDPESPA DLVPKSGEFP TERVQYTSLV
LDEILRPDNA PPLIDISSPQ FTPIDATRVT DADFGFSTLG LGMLLTLNQS WFMQGVTLGH
LLHSMALAAG ESTRLAVVDW SRKESAGQTE VLGETEELAQ DTSRNRSISE VTQAVAREAQ
SGFSHTESQS TTKQVGASAG ISIGPFGGGV SASLSKTSTS ADSYATSAGS REVGASMLQN
ASDRTHQHAH ASRTRRASVV REVSQTEHEA VSTRVITNYN HMHALTVQYY EVLQIYRTEI
ALTRCDRVVF VPFRLIDFAN VDLLRRFRAA LIDAALTPAV RDALVNFDML ELVPERRVVF
PGLGGSIAEV LENPRVLIRP ARLARRRRPP GEEEPVPEGE PPEPPEPEEE PPTRPPRPGR
PDDVAGTLWE SAASKLSSFF GTPSVRRNSQ SLFVPSDVQI EEGAVQSTMR TIKLVFVLRD
GTRIVDLSAS VALSEVDRIA LQGSNPAADT PATAVLALSR NGVVFPLELP TVTVEKGAQE
TKLIDVRAAG ADVNLVQHLM DNRLHYSQAV FRSLDPAMIA GLLAPFSITL NGRNFPLVQV
AEPIPLRIVG NALAFKINTD PVNDQEWRDF MASRGLVIGQ SKVDIVPLSS GGIFAEAVLG
RFNCAEKLDM SRFFNWQDSP IPIQPSEIAA IQTGSRARDV NLTPGQFSQP LVSISQPAAL
PDPTGLAGTL AAIQNGAMFR DMSGLADTIK LATETAKLSA AGATAVGQQA GEAMKTSVSA
DTERRKIAAD LEKAKVQAAT DLAKAKLGKS IQDKNITEAG AVVNKEEELK KKQQEQAKAA
GGKAPAGGGT SGGGGTSGGT SGGGTSGSSG SGGGGGSSGP AAPRSTGNSA LDRIIGNDES
LRSFIGLAPD SPVPTPAVTD EGVPLQDWDF IGGGYALFYQ ETNAGPRELA AGAQIEEIIA
ADSWTPTKAE DFRSLLLGDR KVLAADFGDL LFALALLPAG SMRALNIVAY AKNNRSLALT
REFIYTKSDE SFTIRDAEPT TLSALDLQKL ISLNGGAPIS TSDGDVKLAD VRKAFAVDGE
VRIFNLETPL SPEYVQAMAN FFQVRATGFV KKQVRVAAEV IATTENGEPV LDKKASLQGD
PAGQTVDVLV NLLEQDRAQS GLFTAFPRRG
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