Gene Tbd_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1223 
Symbol 
ID3673312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1276975 
End bp1277358 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content71% 
IMG OID637709907 
Producthypothetical protein 
Protein accessionYP_314981 
Protein GI74317241 
COG category[R] General function prediction only 
COG ID[COG3565] Predicted dioxygenase of extradiol dioxygenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT CGCCACACAT CGCCGGCCTG TTGCACGCGG GCCTGCTGGT ATCCGACCTC 
GCGCACGCGC AGGCCTTCTA CGAGGGCGTG CTGGGTCTGG CCCCGTGTCC TCGTCCTGAG
TTGCCGTATC CCGGCATCTG GTATGACCTC GGCGGCGGGC AGCAACTGCA CCTGATGCGC
TTGCCGAATC CGGATGCTGC CGCGGCGCGC CCCGAGCACG GCGGGCGCGA CCGCCACGTC
GCACTGGGCG CGGGCGATCT CGCGGCCCTC GCGCGCCGGC TCGACGCCGC CGGCATCGCC
TACACCACGA GCAAGTCGGG GCGCGCAGCG CTGTTCTGCC GCGATCCCGA CGCGAACACG
CTCGAATTCG TCGAGCACCG ATAG
 
Protein sequence
MAESPHIAGL LHAGLLVSDL AHAQAFYEGV LGLAPCPRPE LPYPGIWYDL GGGQQLHLMR 
LPNPDAAAAR PEHGGRDRHV ALGAGDLAAL ARRLDAAGIA YTTSKSGRAA LFCRDPDANT
LEFVEHR