| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1220 |
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| Symbol | dapD |
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| ID | 3673309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1273921 |
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| End bp | 1274745 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637709904 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_314978 |
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| Protein GI | 74317238 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAC TCCAGCCCAT CATCGAAGAA GCCTTCGAAC GCCGCGCCGA CATCACGCCG
CGCAACGCGA CCCCGCAGGT CAAGGACGCC GTCATGGCCG TCATCGACCT GCTCGACATG
GGACAGCTGC GCGTCGCCGA GCGGACGGAC GGCCAGAACT GGACGACGAA CCAGTGGGTC
AAGAAGGCCG TGCTGCTGTC GTTCCGCCTC GAGGACAACG CCTTCATCAA GGGCGGCTAC
ACCAATTATT ACGACAAGGT GCCGTCGAAG TTCGCCGACT TCAACTCGAA GGACTTCCGC
GAAGGCGGCT TCCGCGTCGT GCCGCCTGCG GCCGCGCGCA AGGGCTCCTA CATCGGCAAG
AACGTCGTGC TGATGCCTTC CTACGTCAAC ATCGGCGCCT ACGTCGACGA AGGCACGATG
GTCGACACCT GGGCGACGGT TGGTTCCTGC GCGCAGATCG GCAAGAACGT CCACCTCTCG
GGCGGTGTTG GCATCGGCGG CGTGCTCGAG CCGGTGCAGG CCAACCCGAC GATCATCGGC
GACAACTGCT TCATCGGCGC GCGTTCCGAA GTCGTCGAGG GCGTGATCGT CGAGGACAAC
TGCGTGATCT CGATGGGCGT CTACATCGGC CAATCGACCA AGATCTACGA CCGCGAGACC
GGCGAAATCC ACTACGGCCG CGTGCCGGCC GGCTCGGTCG TCGTCTCCGG CAACCTCCCT
TCCAAGGACG GCAGCTATAG TCTGTATTGT GCGGTGATCG TGAAGAAGGT CGACGCCAAG
ACGCTGTCCA AGGTCGGCAT CAACGAACTG CTGCGCGGAA TCTGA
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| Protein sequence | MQELQPIIEE AFERRADITP RNATPQVKDA VMAVIDLLDM GQLRVAERTD GQNWTTNQWV
KKAVLLSFRL EDNAFIKGGY TNYYDKVPSK FADFNSKDFR EGGFRVVPPA AARKGSYIGK
NVVLMPSYVN IGAYVDEGTM VDTWATVGSC AQIGKNVHLS GGVGIGGVLE PVQANPTIIG
DNCFIGARSE VVEGVIVEDN CVISMGVYIG QSTKIYDRET GEIHYGRVPA GSVVVSGNLP
SKDGSYSLYC AVIVKKVDAK TLSKVGINEL LRGI
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