Gene Tbd_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1219 
Symbol 
ID3673308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1273056 
End bp1273832 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content68% 
IMG OID637709903 
Producthypothetical protein 
Protein accessionYP_314977 
Protein GI74317237 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA AACTCGTCGT GACCGCGCTG CTCGCCGCCA GCCTCCTCGG CTGCGAGGCG 
AACCCCGTGT CGGGCCGCAA GCAGCTCGTG CTGGTGTCCG AAGAACAGGC CCAGGCCTCG
TCGGCGCAGG CCTACGTGCA GACGATCAGC GCGGCGCAGA AGCAGGGCAA GCTCAGCACC
GACACCGCGC TGAACGCCCG CGTCAAGCGC ATCACCGACC GTCTGGTGAC CCAGGCCGAG
GCCATGTACC CACCGAGCCG CGACTGGAAA TGGTCGGTCG CGGTCATCGA CGAGCCGACG
CTCAACGCCT GGTGCATGCC GGGCGGCAAG ATGGCGATCT ATACCGGCAT CGTGCGCAAA
CTCAACCTGA CCGACGACGA AATCGCCCAG ATCATGGGCC ACGAGATCAC CCACGCCCTG
CTCGGCCACG GCCGCGAGCG CATGTCGCGC GCAATTGCGA TGCAGGGCGG CATGGCGCTT
GGCTCGATCG TCTCGGGGCG CGACCTGAGC ATTCTCGCGC CCGTCGCCGA CGTCGCAATC
ACGCTGCCGA ACAGCCGCGA GGGCGAAACC GAAGCCGACC GCTATGGCCT CGAGCTCGCC
GCGCGCGCCG GCTTCGACCC GCGCGCCGCC GTGCGCCTGT GGGAGAAAAT GAGTCAGGCG
AGCGGCAACG GCCCGCCGCA ATTCCTCAGC ACCCACCCCG CGCCGGGCAA TCGCATCCAG
GCGCTCAACG CACTCGTGCC ACAGATGATG CCGATCTACG AGAAGGCGCG TCGATGA
 
Protein sequence
MNRKLVVTAL LAASLLGCEA NPVSGRKQLV LVSEEQAQAS SAQAYVQTIS AAQKQGKLST 
DTALNARVKR ITDRLVTQAE AMYPPSRDWK WSVAVIDEPT LNAWCMPGGK MAIYTGIVRK
LNLTDDEIAQ IMGHEITHAL LGHGRERMSR AIAMQGGMAL GSIVSGRDLS ILAPVADVAI
TLPNSREGET EADRYGLELA ARAGFDPRAA VRLWEKMSQA SGNGPPQFLS THPAPGNRIQ
ALNALVPQMM PIYEKARR