| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1215 |
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| Symbol | |
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| ID | 3673304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1270724 |
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| End bp | 1271704 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637709899 |
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| Product | integron integrase |
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| Protein accession | YP_314973 |
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| Protein GI | 74317233 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.522408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCTA AGGCTGTTTC TCAAGATTCG CCTAAATTGC TCGACCGGGT TCGGGCCGAG
ATCCGCGTGC GCCACTACAG CCTGCGCACC GAGCAGTCCT ACGTCGACTG GGCGCGGCGC
TACATCCTCT TTCACCAGAA GCGGCACCCG GCGGAGATGG GCGCGGCAGA GGTGCGCGAA
TTTCTTTCCC ATCTGGCGGT CGAGCGGAAT GTTTCGGCTT CGACGCAGAA TCAGGCCAAG
TCGGCGCTGC TTTTCCTCTA TCGCGAGGTG TTGAAGATCG AATTGCCGTG GCTCGACGAG
GTTGTCGTCG CGAAGTCGGC GAAGCGCCTG CCCGTGGTGC TGACGCAGGT CGAGGTGCGC
GCGTTGCTGA ACGCGATGTC GGGGACGATG GGCCTGGTGG CGAGCCTGCT CTACGGCACT
GGGATGCGGC TGCTCGAGGG GTTACGCCTG CGCGTCAAGG ACGTGGAGTT CTCGCGGCGC
GAGATCATCG TGCGCGAGGG CAAAGGCAAC AAGGATCGGG TGACGGTGCT GCCGGAAAAC
CTGATCCTGC CGCTCAAGGC GCATCTCGAG AAGGTGCGGA CGCTGCACGA GCGCGATCTC
GAAGCGGGCT ACGGCGCGGT CTATCTTCCC GATGCGCTGG CGGCCAAGTA TCCGAATGCG
GCCCGCGCCT GGGGCTGGCA GTACGTCTTT CCGTCGCCGG TGCGTGCGGT CGATCCGCGC
TCGGGTGTCG AGCGCCGGCA CCACGTCTAC GAAACGAGCG TGCAGCGCGC GGTGCGCGAA
GCGGCGAGGG CGGCCGGCCT GCACAAGCCG GTGACGCCGC ACGTTTTGCG CCATTCGTTC
GCGACGCATC TGTTGCAGGC CGGTTACGAT ATCCGCACGG TGCAGGAACT GCTCGGCCAC
AAGGACGTTT CGACGACGAT GATTTACACC CACGTATTGA ACAAGGGCGG GCGCGGCGTG
ACGAGCCCGC TCGACATGTG A
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| Protein sequence | MEAKAVSQDS PKLLDRVRAE IRVRHYSLRT EQSYVDWARR YILFHQKRHP AEMGAAEVRE
FLSHLAVERN VSASTQNQAK SALLFLYREV LKIELPWLDE VVVAKSAKRL PVVLTQVEVR
ALLNAMSGTM GLVASLLYGT GMRLLEGLRL RVKDVEFSRR EIIVREGKGN KDRVTVLPEN
LILPLKAHLE KVRTLHERDL EAGYGAVYLP DALAAKYPNA ARAWGWQYVF PSPVRAVDPR
SGVERRHHVY ETSVQRAVRE AARAAGLHKP VTPHVLRHSF ATHLLQAGYD IRTVQELLGH
KDVSTTMIYT HVLNKGGRGV TSPLDM
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