Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1196 |
Symbol | |
ID | 3671557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1258739 |
End bp | 1259260 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637709880 |
Product | outer membrane lipoprotein |
Protein accession | YP_314954 |
Protein GI | 74317214 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCCCG CCTACCCCGT CCTCGTCGCG CTCGTCTGGC TCACCGCCTG CGCGTCGCCG ATGCCGCAGC CGCTTCCTAC CGTCGGCGCC GTCGACCTGC AGCGCTATGC GGGGACCTGG TACGAAATCG CGCGCCTGCC CAACCGCTTC CAGTCGATGT GCGCGTCGGA CGTGCGCGCG CACTACGCGC CTGAGGACGG CGCGATCGCG GTCGTCAACA GTTGCCGCAC CGGCGACGGC AAGCTCGAGC GGGCCGAAGG CGTCGCGCAC GTCGTCGCCG GCAGCGCGGG CAGCAAGCTG CGCGTGAGCT TCTTTCGCCC GTTCTACGGC GACTACTGGA TACTCGCGCT CGACCCCGAC TACCGCTGGG TCCTCGTCGG CGAGCCGGCC GGGCGCTATG CCTGGGTGCT GGCGCGCGCA CCCGAACTCG ACGACGCGAC GCTCGCGCGC CTGCTCGCGC GCGCCGACGC ACTCGGCTTC GCGCGGCAGG CCTTCGTGCG CACGCCGCAC ACGGGGCACT GA
|
Protein sequence | MSPAYPVLVA LVWLTACASP MPQPLPTVGA VDLQRYAGTW YEIARLPNRF QSMCASDVRA HYAPEDGAIA VVNSCRTGDG KLERAEGVAH VVAGSAGSKL RVSFFRPFYG DYWILALDPD YRWVLVGEPA GRYAWVLARA PELDDATLAR LLARADALGF ARQAFVRTPH TGH
|
| |