Gene Tbd_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1196 
Symbol 
ID3671557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1258739 
End bp1259260 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content73% 
IMG OID637709880 
Productouter membrane lipoprotein 
Protein accessionYP_314954 
Protein GI74317214 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCG CCTACCCCGT CCTCGTCGCG CTCGTCTGGC TCACCGCCTG CGCGTCGCCG 
ATGCCGCAGC CGCTTCCTAC CGTCGGCGCC GTCGACCTGC AGCGCTATGC GGGGACCTGG
TACGAAATCG CGCGCCTGCC CAACCGCTTC CAGTCGATGT GCGCGTCGGA CGTGCGCGCG
CACTACGCGC CTGAGGACGG CGCGATCGCG GTCGTCAACA GTTGCCGCAC CGGCGACGGC
AAGCTCGAGC GGGCCGAAGG CGTCGCGCAC GTCGTCGCCG GCAGCGCGGG CAGCAAGCTG
CGCGTGAGCT TCTTTCGCCC GTTCTACGGC GACTACTGGA TACTCGCGCT CGACCCCGAC
TACCGCTGGG TCCTCGTCGG CGAGCCGGCC GGGCGCTATG CCTGGGTGCT GGCGCGCGCA
CCCGAACTCG ACGACGCGAC GCTCGCGCGC CTGCTCGCGC GCGCCGACGC ACTCGGCTTC
GCGCGGCAGG CCTTCGTGCG CACGCCGCAC ACGGGGCACT GA
 
Protein sequence
MSPAYPVLVA LVWLTACASP MPQPLPTVGA VDLQRYAGTW YEIARLPNRF QSMCASDVRA 
HYAPEDGAIA VVNSCRTGDG KLERAEGVAH VVAGSAGSKL RVSFFRPFYG DYWILALDPD
YRWVLVGEPA GRYAWVLARA PELDDATLAR LLARADALGF ARQAFVRTPH TGH