| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1188 |
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| Symbol | sucA |
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| ID | 3671549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1246924 |
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| End bp | 1249929 |
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| Gene Length | 3006 bp |
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| Protein Length | 1001 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709872 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_314946 |
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| Protein GI | 161899034 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.489523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGATCC GCAGTTCAAG ATCGCGCTCG AGCTCGAGCG CATCGCGCTT GAGGACGAGT
ACTTCATCGA GCGCAAACTC TATCCGAACG TCGACTTCTA TTCGGGCATC ATCTTCCGCG
CGATGGGTAT TCCGACCAGC ATGTTCACGG CATTGTTCGC GATGGCGCGC ACGGCCGGCT
GGGTCGCGCA GTGGCACGAG ATGTTATCCG ACCCGGCGCA CAAGATCGGC CGCCCGCGCC
AGCTCTACGC GGGTCCGGCG CGACGCGACT TCGTGCCGCT CGACCAGCGC AGGGCCTGAG
CTCGCCGCCG GCATGAGCGC GCCCGACTGG CTTTCGACCT CGCCGCTCTA CTCGGGCAAC
GCGGCGTATC TCGAGCAGTT CGGCGACGCC GCCCTCGCGG CCTGGCTCGG CCGACCGGTG
TCGGCCGCGA CTGACGAATC GGACGCCGCG CAGGTCGCCG TCCTGCGTCT GATCAACGCC
TATCGCTATC TGGGTGTTCG CCAGGCTGCG CTTGATCCGC TGCGCCGTTT CGAGCCGCCG
TCGACCCCCG AACTCGATCC CGCACACTAC GGCCTGACCG ACGCCGACCT CACGCGCGAA
TTCGATACCG GCTCGCTGTT CGGGGTCGAG CGCACGACGC TCGACGACAT CCTGCAGCGC
TTGCGCAGCG CCTACTGCGG CCACGTCGGC GTCGAATACA TGCACATCAC GGAGGTCACG
CGCAAGCGCT GGCTGCAGGA ACGCATCGAA TCGGCGCAGG GCCGTTTCGG CGTCACGGCG
GCGCAGAAAA AACGCCTGCT CAAGCGACTG ACCGACGCCG AGACGCTCGA GAAATTCCTG
CACACGCGCC ACGTCGGGCA GAAGCGTTTT TCGCTCGAAG GCGGTGAAAG CCTGATCCCG
CTGCTCGACC ACGTGATCGC CCGCTGCGCA CGGCACGGCG CGAAGGAAAT CGTCATGGGC
ATGGCGCATC GCGGCCGCAT CAACGTGCTC GTCAACATCA TGGGCCGCAC GGTCGACAGC
CTGTACGACG AGCCGCAGGA CGGCCATCCC GAGACACCGC TGTCGGGCGA CGTCAAATAC
CATCAGGGAT TCTCGACCGA CATGGGCACC GACTACGGGC CGGTCCATCT CGCGCTCGCC
TTCAATCCCT CGCATCTCGA AATCGTGCAC CCGGTCGTGC GCGGCTCGGT GCGTGCGCGC
CAGGACCGGC GCGGCGACGT GCTCGGCTAC GAGGTCGTGC CGGTGATCCT GCACGGCGAC
GCGGCGCTGT CGGGGCAGGG CGTCGTCATG GAAAGCCTCA ACATGTCGCA GACGCGGGGC
TTCCGCAACG GCGGTGCTAT CCACGTCGTC ATCAACAACC AGATCGGCTT CACTACATCC
GATCCGCGCG ACGTGCGCTC GACGCTTTAT TGCACCGACG TCGCGAAGAT GGTCGAAGCG
CCGGTCCTGC ACGTCAACGG CGACGACCCC GAGGCGGTCG CGTTCGCGGT CCAAACCGCG
GTCGACTACC GCTACACCTT CCACAAGAAC GTCTTCATCG ACCTCGTCTG CTATCGCCGT
CACGGCCACA ACGAACAGGA CGAGCCGCTG GCCACCCAGC CCTTGATGTA CCGGCGCGTG
CAGGCGCATC CGAGCACGCG CACGCTCTAC GCCCAGCGCC TGGTCGACGA GGGCGTGCTG
ACCCAGGCCG AGGCCGACGA TCTGGTCGAC GTGTGTCGCG AGCGCCTCGA GCACGGCAGG
CCGCTGAGCG CGCCGGCACT GTCCGATTTC AAGGAAACCT TCGCCACCGA CTGGAGCCGC
TTCCGCGGCG ATGCGGGCGC CGCGACGCCG GGTATTTCCG CGACGCGCCT CGACTTTCTC
GGCGAGCGCA TCACGACGCT GGAGCACGAG ATCGAGCTGC ATCCGCGCGT GCAGAAGGTG
CTCGACGACC GCCGGCGCAT GCGTGCGGGC GAACTCGCGG TCGACTGGGG CTACGCCGAG
AACCTCGCCT ACGCGAGCCT GCTCGACGTC GGCTACAACG TCCGCGTCTC GGGCCAGGAC
TCGGCACGCG GCACCTTCTT CCACCGCCAC GCGGTGTGGC ACGACCAGAA GCGCGAACGC
CGGCAGAGTG GGGTCTACGT GCCGCTCGAA CACATCCACG CGCGCCAGGG CAACTTCACG
ATCATCGATT CGCTGCTGTC GGAGGAAGCC GTGCTCGCGT TCGAGTACGG CTATTCGACG
GCCGATCCCG ACACGCTCGT CGTGTGGGAG GCGCAGTTCG GCGACTTCGC GAACGGCGCA
CAGGTCGTCA TCGACCAGTT CATCACCAGC GGCGAAGCCA AGTGGGGCAG GCTCTGCGGC
CTCACCCTGA TGCTGCCGCA CGGCTTCGAG GGGCAGGGGC CCGAACATTC GTCGGCGCGC
CTCGAACGCT TCCTGCAACT GTGCGCACAG GAAAACATCC AGGTCTGCGT GCCGACGCTG
CCCGCGCAGA TGTTCCACCT CCTGCGGCGG CAACTGCTGC GCCCGCTCAG AAAGCCGCTC
GTCGTTCTGA GCCCGAAAAG CCTGCTGCGC CACCCGGCGT CGACCTCGTC GCTGGCCGAC
CTCTCGGACG GCGCCTTCCT GCCGGTCATC GACGATCCGC GCCAGCCGCG CGAGGCGCGG
CGCGTCGTCG TGTGCAGCGG CCGGGTCTGG TTCGACCTCG AAGCGGCCCG GGCTGCCCGC
GGCCTCGACG ATGTCGCACT CGTGCGCATC GAGCAGCTCT ATCCCTTCCC GGACGCCGAA
TTCGGCGCAG TGCTCGACGT CTATCCGCTC GCCGGAACAT TGGTCTGGGC ACAGGAAGAG
CCGATGAACC AGGGCGCCTG GTATCAGACG CTGCACCACC TCAATCGCTG CGCCCCGGCC
GGACGACGTT TCCACTACGC CGGCCGGCCC GCGGCCGCGG CGCCCGCGTC GGGCTACATC
TCGCGCCATC GTGCCGAACT TGAAGCGCTG CTGCGCGACG CCCTGGAGAC CTCGTATGAA
GTTTGA
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| Protein sequence | MTIRSSRSRS SSSASRLRTS TSSSANSIRT STSIRASSSA RWVFRPACSR HCSRWRARPA
GSRSGTRCYP TRRTRSAARA SSTRVRRDAT SCRSTSAGPE LAAGMSAPDW LSTSPLYSGN
AAYLEQFGDA ALAAWLGRPV SAATDESDAA QVAVLRLINA YRYLGVRQAA LDPLRRFEPP
STPELDPAHY GLTDADLTRE FDTGSLFGVE RTTLDDILQR LRSAYCGHVG VEYMHITEVT
RKRWLQERIE SAQGRFGVTA AQKKRLLKRL TDAETLEKFL HTRHVGQKRF SLEGGESLIP
LLDHVIARCA RHGAKEIVMG MAHRGRINVL VNIMGRTVDS LYDEPQDGHP ETPLSGDVKY
HQGFSTDMGT DYGPVHLALA FNPSHLEIVH PVVRGSVRAR QDRRGDVLGY EVVPVILHGD
AALSGQGVVM ESLNMSQTRG FRNGGAIHVV INNQIGFTTS DPRDVRSTLY CTDVAKMVEA
PVLHVNGDDP EAVAFAVQTA VDYRYTFHKN VFIDLVCYRR HGHNEQDEPL ATQPLMYRRV
QAHPSTRTLY AQRLVDEGVL TQAEADDLVD VCRERLEHGR PLSAPALSDF KETFATDWSR
FRGDAGAATP GISATRLDFL GERITTLEHE IELHPRVQKV LDDRRRMRAG ELAVDWGYAE
NLAYASLLDV GYNVRVSGQD SARGTFFHRH AVWHDQKRER RQSGVYVPLE HIHARQGNFT
IIDSLLSEEA VLAFEYGYST ADPDTLVVWE AQFGDFANGA QVVIDQFITS GEAKWGRLCG
LTLMLPHGFE GQGPEHSSAR LERFLQLCAQ ENIQVCVPTL PAQMFHLLRR QLLRPLRKPL
VVLSPKSLLR HPASTSSLAD LSDGAFLPVI DDPRQPREAR RVVVCSGRVW FDLEAARAAR
GLDDVALVRI EQLYPFPDAE FGAVLDVYPL AGTLVWAQEE PMNQGAWYQT LHHLNRCAPA
GRRFHYAGRP AAAAPASGYI SRHRAELEAL LRDALETSYE V
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