Gene Tbd_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1184 
Symbol 
ID3671545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1243085 
End bp1244839 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content70% 
IMG OID637709868 
Productsuccinate dehydrogenase subunit A 
Protein accessionYP_314942 
Protein GI74317202 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGGC GCCGCTTCGA CGCGCTGATC GTCGGCGGCG GCGGTGCCGG CCTGCGCGCC 
GCGCTGCAGC TTGCGCGCTC GGACCACAAG GTCGCCGTGG TGTCGAAGGT ATTCCCGACA
CGCTCGCACA CCGTTTCTGC ACAGGGCGGC ATCACGGCGG CGCTGGCGAA CGTCGACGAC
GACCGCTGGG AATGGCACAT GTACGACACG GTCAAGGGCG GCGACTGGCT GGGCGACCAG
GATGCGATCG AGTTCATGTG CCGCGAGGCG GCGTCGGCCG TCTACGAACT CGAACACATG
GGGCTGCCGT TCTCGCGGCT CGACGATGGC AGGATCTACC AGCGGCCCTT CGGCGGGCAG
TCGAAAAACT TCGGCGGCGA GCAGGCGACG CGCACCTGCG CCGCGGCCGA CCGCACCGGC
CATGCGCTGC TGCACACGCT CTACCAGCAG AACATCGCGC ACCGCACGCA ATTCTTCGAC
GAATACTTCG CGCTCGACCT CGTGCGCGAC GACGCGGGCT ACTGCCTCGG CGTGACCGCG
CTTTCCATCG AAACCGGCGA GCCGGTGTTG ATCGAGGCGC GCACGACGCT GCTCGCGACG
GGCGGGGCAG GGCGCATTTT CGGCAACACC AGCAACGCGA TGATCAACAC CGGCGACGGC
CTCGGCATGG TCCTGCGCGC CGGCCTGCCG CTGCAGGACA TGGAGTTCTG GCAGTTCCAC
CCGACCGGGA TCGCCGGCGT CGGCAGCCTT ATTACCGAAG GCGCGCGTGG CGAGGGCGGC
TACCTGCTGA ACCGTCACGG CGAGCGCTTC ATGGAGCGCT ACGCACCGCA CGCCCGGGAC
CTCGCCGGCC GCGACGTGGT CGCCCGCGCG ATCGCGATCG AGATCGCGGA AGGGCGCGGC
TGCGGGCCCC GGGCGGACTA CGTCGAGCTC AAGATCGACC AGCTCGGCGA ACAGACCATT
TCGGAGAAAC TGCCGGGCAT CCGCGAACTC GCGATCCGCT TCGCCGGCGT CGACCCGGTC
GAGAAGCCGA TTCCAGTCGC ACCGACGGCG CACTACATGA TGGGCGGCAT TCCGACCGAC
CTGCATGGCC AGGTCGTCGC CCCCGCGCGC TTCGGCCCCG AGGAGCCGGT GCCCGGCCTC
TATGCCGTCG GCGAGTGTGC CTGCGTGTCG GTGCACGGCG CGAACCGCCT CGGCGGCAAC
TCGCTGCTCG ACCTCATCGT CTTCGGCCGC GCCGCGGGCC GGCACATGCT CGACTACCTG
CGCGACAACC CCTACCCGCG CGCGCTGCCC GAGAATGCCG CCGAAGCGAG CCTGCAGCGC
CTCGCGCGCT GGGAGCGCCC GGGCGGCGAA CGCGTCGCCG CGATCACCGA CGACCTGCGG
CGCATGATGG GCGCGCACGC CGGCGTTTTC CGCACCGAGA CGAGCCTGCG CGAAGGCCTG
CGCAAACTCG ACCTGCTCGA AGCGCGGCTC GCGCACGCCG GCCTGCAGGA CACCAGCCGC
ATCTTCAACA CGGCGCGCAT CGAAGCGCTC GAGCTGGAAA ACCTGATCGG GGTCGCGCGC
GCGACCCTGG TCTCGGCGAT CCACCGCACC GAGAGCCGCG GCGCCCATAC GCGCGAGGAC
TTCCCGCGAC GCGACGACGA GAACTGGCTC AGGCACACCC TCTATTCGCG CGAGGGGGAT
CAGGTGGATA GCAAGCCGGT GCGCTTGAAG CCGTTGACCG TGGAGTCGAT ACGGCCGAAG
GAGAGGGTGT ATTGA
 
Protein sequence
MNRRRFDALI VGGGGAGLRA ALQLARSDHK VAVVSKVFPT RSHTVSAQGG ITAALANVDD 
DRWEWHMYDT VKGGDWLGDQ DAIEFMCREA ASAVYELEHM GLPFSRLDDG RIYQRPFGGQ
SKNFGGEQAT RTCAAADRTG HALLHTLYQQ NIAHRTQFFD EYFALDLVRD DAGYCLGVTA
LSIETGEPVL IEARTTLLAT GGAGRIFGNT SNAMINTGDG LGMVLRAGLP LQDMEFWQFH
PTGIAGVGSL ITEGARGEGG YLLNRHGERF MERYAPHARD LAGRDVVARA IAIEIAEGRG
CGPRADYVEL KIDQLGEQTI SEKLPGIREL AIRFAGVDPV EKPIPVAPTA HYMMGGIPTD
LHGQVVAPAR FGPEEPVPGL YAVGECACVS VHGANRLGGN SLLDLIVFGR AAGRHMLDYL
RDNPYPRALP ENAAEASLQR LARWERPGGE RVAAITDDLR RMMGAHAGVF RTETSLREGL
RKLDLLEARL AHAGLQDTSR IFNTARIEAL ELENLIGVAR ATLVSAIHRT ESRGAHTRED
FPRRDDENWL RHTLYSREGD QVDSKPVRLK PLTVESIRPK ERVY