| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1180 |
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| Symbol | |
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| ID | 3671541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1240327 |
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| End bp | 1241037 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637709864 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_314938 |
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| Protein GI | 74317198 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGTA AACCATCGTC GCAGGACGAG CAGATCACCA AATATGCACC GCTGGTCAAG
CGCATCGCGT ATCACATGAT GGCGCGCCTG CCGGCCAGCG TCGAAGTCGA CGACCTGATC
CAGGTCGGGT TGATCGGCCT CATGGACGCC GTATCGCGCT TCGACGGCAC GCAGGGTGCG
CAATTCGAGT CGTATGCGAC GCAGCGCATC CGTGGCGCGA TGCTCGACGA GTTGCGCGAG
GCGGACTGGC TGCCGCGCCA CGTACGGCAG AAGTCACGGC AGATCGAAGC GGCGATCCAC
AAGCTCGAAC AGCGGCACGG CAAGGCGCCG AGCGAGTCGG AAATATCGGC CGAACTCGGC
ATTCCGATCG ATCAGTACCA GTCGATGCTT GGCGACGTCA AATGCTCGCA GCTGCTCTAC
TACGAGGATT TTTCCGACGA GGACAGCGCG AGTTTTCTCG AACGCTATCT CGTCGACGGC
AGCAACGATC CGCTCGCGGT GCTCGAGGAC GAGGGCTTCC GCGCCAGCCT GATCGCAGCG
ATCCATCACC TGCCCGAGCG CGAGCGCAGC ATGATGGGCA TGTACTACGA GCAGGACATG
AACCTCAAGG AGATCGGCGC GGTGCTCGGC GTCTCCGAAT CACGCGTATG CCAGCTGCAC
TCGCAGGCCG TCGCGCGGCT GCGCGCGCAA CTCAAGATCT GGAAAGACTG A
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| Protein sequence | MVGKPSSQDE QITKYAPLVK RIAYHMMARL PASVEVDDLI QVGLIGLMDA VSRFDGTQGA
QFESYATQRI RGAMLDELRE ADWLPRHVRQ KSRQIEAAIH KLEQRHGKAP SESEISAELG
IPIDQYQSML GDVKCSQLLY YEDFSDEDSA SFLERYLVDG SNDPLAVLED EGFRASLIAA
IHHLPERERS MMGMYYEQDM NLKEIGAVLG VSESRVCQLH SQAVARLRAQ LKIWKD
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