| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1174 |
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| Symbol | |
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| ID | 3671535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1229093 |
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| End bp | 1234240 |
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| Gene Length | 5148 bp |
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| Protein Length | 1715 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709858 |
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| Product | putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase |
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| Protein accession | YP_314932 |
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| Protein GI | 74317192 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase
[COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase
[TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.814781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC TGCTCGATCA GGCCTGCGAA CGCTGCGGGA TACTGCCGGA GTACTACGAC
ATATGGGGTG GGGCGCATCC GACCAGCGAG GCGGCGAAGC GCGCCTTGCT CGAGGCGATG
GGTGTCCCCG CGGCGAGCGA CGCGGATCTC GCGCGCTCGC TCGACGAACT CGAGCGGCGC
GAGTGGTCGC GCGCGCTGCC GCCCGTGGTC GTCGTTCGCG AGCCTGAACG CCCGTATCGC
GTGCCGCTCG TCGTCGCGGA GGCGGACTTG GGAGCCGGCA GGCGCTGGAA GCTGCGCCAG
GAGTCGGGGG GCGAGATCGC TGGCGAGTTT TCCCCGGCCG CACTCGAAGA GGTGGCGCGT
GTCACGTTCG ATGGCGTCGC CTACACGCGG CGGACGCTCG TACTCGCGAT CGAACCCGGC
CTGGGATATC ACCGCTTCGT GGTCGAGCGC GCGGATGGGG GCGGCGAGGC CTGCGAGATG
TCATTCATCG TCGCGCCGCC GGCCTGTTAC CAGCCGCCGG CGATTCACGG CGACGGGCGC
GCCTGGGGCA TCGCCGCGCA GCTCTATGGC GTGCGATCCG AACGCAACTG GGGCATCGGC
GACTTCGGCG ACCTGCGGCA CATGCTCGAA TTCTGCGCAG ACAGCGGTGC GGGCTCGGTG
CTGCTCAATC CGTTGCATGC GATGTTTCCG GACGCGCCCG AGCACGCGAG CCCCTACAGT
CCGTCCAATC GCGCGTATTT CAACACGCTG TATCTCGACG TCGAGGAGAT CACCGATTTC
GGCGAGTGCG AGGCGGTGCG CGCGGTCGTC CACGCGCCGC ATTTTCAGGC GCGGCTGCGT
GCCCTGCGCG CTGCCGATCA AGTCGACTAC CGCGGCGTCG CCGACGCCAA GGCCGAGGTG
CTGCGCGAGC TCTACGCGCA TTTCCGCGCC GAGCACCTGG CGCGCGAGAG TGCGCGAGGG
CGGGAATTCC GGGCGTTCCA GGCGGCCCAC GGCAACAGCC TGCGCAGTCA GGCCCTGTTC
GAGGCGCTGC AGACCCATTT CCGCAACGAG GATGGCGCAG TCTGGGGCTG GCCGGTGTGG
CCGGAGGCCT ACCGCACGCG CGAAGCGCCC GAGGTCTCCG CGTTCGGCGA GGCCAACCTC
GAGCAGGTCG AGTATTTCGA ATACCTGCAA TGGCAGGCGT CGCTGCAGTT GCGGGCTGCC
GGTACGCGGT CGTGGGAGCT CGGGCTCGGC GTCGGCGTGA TGCTCGACCT CGCGATCGGC
GTCGCCGAGG GCGGGGCGGC CACCTGGATG TGCCGCGACC TCTACGCGTT CGGCGCGAGC
GCGGGCGCGC CGCCCGATGA ATTCAACCGG CTGGGGCAGG ACTGGGGCCT GCCGCCGTGG
ATTCCGCACC GGCTCAAGGC GCGCGCCTAC GAGCCTTTCA TCGAACTGAT CCGCGCCAAC
ATGCGCGATT CAGGCGCGCT GCGGCTCGAC CACGTGATGG GGCTCTTCCG CCTGTTCTGG
GTGGCGCGCG GGCTGCCGAT CAGCCAAGGC GCCTACGTCG CCTATCCGTT TCGCGACCTG
CTCGGCATCC TCGCGCTCGA GAGTCAGCGC AACCGCTGTC TCGTCGTCGG CGAGGACCTC
GGCACCGTGC CGGAGGAAGT GCGGGCCGTG CTGCAGCCGA TGGAAGTCCT CTCGACCCGG
CTGCTCTATT TCGAGCGCCA GGAAAACGGC CGGCTCGCGC CGCCCGGTTC CTATCCGGCG
AACGCGGTCG CCGCGGTTAC GACCCACGAC CTGCCGACGC TTGCCGGCTA CTGGCGCGGA
CTCGATATCG ACCTGCGCGA ACAGCTGCGT CTCTTTCCCG ACGCCGAGGT GCGCAACCAG
CAGGTCATCG CGCGTTCGGA AGATCGCGCC CAGCTGCTCG TCGCGCTCGA AGGCGAGCAG
GTGTTGCCGC CCGGCGGCGT CCAGCCGGTG GCCTTTCCCG AGTTGACGAC CGAACTCGCG
GTCGCGGTCT ACACCTACCT CGGGCGCGCG CCGTCGAAGC TGCTGCTGCT GCAACTCGAA
GACGGCTTCG GGGTGCACGA GCAGCCCAAC CTGCCTGGCA CCGTGTCGCC GACTTATCCG
TGCTGGCGAC TCAAGATTCC CATCAACCTC GAGGAGTGGC GCAGCAGCGA ACCCTTGCAG
GGCATCATGC AGGCGCTGCG CCAGGAGCGG CCGGTGACCC AGGTCGCGGG GCCGGCCGGG
GCCGGGATGG AGGAGGGCGT ACGTCTGTGG ATCCCGCGGG CGACCTATCG GCTGCAGCTG
AATCGCGATT TCAAGCTGCC GCAGGCAATG GCGCTGCTGC CGTATCTCGA CGCGCTCGGC
ATCAGCCACT GTTACCTCTC GCCGATCCTC AAGGCGCGGC CCGGCAGCCG CCACGGCTAC
GACATCACCG ACCACAGCAG CCTGAACCCC GAGATCGCGA GCGCCGAGGA CTTCGAGCAG
TTCGTCGCCG AAATCAAGCG CCGCGGCATG GGGCAGATCA TGGATCTGGT GCCTAACCAC
ATGGGCATCA ACGGCGCGGA CAACGCGTGG TGGCTCGACG TGCTGGAGAA CGGGCCGGCC
TCGCGCTACG CCACCTACTT CGACATCGAC TGGTATTCGA ACACGGCCGA CATGTCGGGG
CGCGTCCTGC TGCCCGTGCT CGGCGAGCAT TACGGCGCGG TACTCGACAA GGGCGAACTC
AAGCTCGTGT TCGACCCCGA GGACGGCGCG TTCAGCGTCT TCTACTACGA GCATCGCTTT
CCGGTCGACC CACGCGAATA CCCGCGCATT CTCGGACACG GGCTCGAGCG GCTGCAGGCG
CGGCTCGGCG CGGAGGACAT CGTGCTGCTC GAGTTCCAGG CGCTGGTCAC GACCTTCGGC
CACCTGCCGG CGCGCGACCG CGTCACGCCC GAAGCCGTCG CCGAGCGCAG CCGCGACAAG
GAAGTGCACA AGCATCGCCT GGCCGCGCTC TATGCCGGCA GTGCCGACGT CGCGCGCTTC
ATCGACGAGA ATCTCGCGGA ATTCAACGGC ATCGGGCAGG CCGGCGCGAA CTTCGACCTG
CTGCACGAAC TGCTGCAGAG CCAGGCCTAC CGCCTCGCGT TCTGGCGCGT CGCCGCAGAC
GAGATCAACT ACCGCCGCTT CTTCGACATC AACGATCTGG CGGCACTGCG CATGGACAAC
CCCGAGGTGT TCGAGGCGAC GCATCGCCTG CTGCACGAGC TGCTCGGGCG CGGCTACATC
AACGGCCTGC GTATCGACCA CCCGGACGGC CTCTACGCGC CAAAGGCCTA CTTCGAACGC
CTGCAGGCCA TGGCCGCGAC GCTGATGCCG AAAGTCGGCA ACGGCCATGC CGAGAGCACG
CCGCGCCCGC TTTACCTCAT CGTCGAGAAG ATTCTCGCGG TGCACGAGCA CCTTCCGGAA
TCGTGGGCGG TTCACGGCAC GACGGGCTAC GACTTTGCGG CGGCATGCAC CGGGCTCTTT
GTCGACGCCA GTGCCGCGGA CGCGTTCACG CGCACCTACC AGGGCTTCAT TCGCGCACGC
CCCGCTTACG AAGAAATGGT CCGCGCGAAC AAGCATCTGA TCATGCAGAC CTCGCTCGCG
GGCGAGCTGC AGGTGCTCGC GACCCAGCTC ACGCGGCTGG CGAAGGAGGA CCGCTGCACC
TGCGATTTCA CGCTCAACAG CCTGCGCAGC GCGATCGCCG AGATCGTCGC GAGTTTCCCC
GTTTACCGGA CCTACGTCAC GCCGGGCGAG ACGTCGGCCG ACGATGTGCG CTACGTCGAT
TGGGCAGTCG GCGTCGCCAA GAAACGCAGC CGCGCCGATC CGAGCATTTT CGATTTCGTG
CGCGACGCGA TGCTCGGGCG CCTCGGCCGG GTCGATCGCG ACGACTACCG CGAGGCGGTC
GCCGCGTTCG CGATGAAGTT CCAGCAATAC AGCAGCCCGG TGACGGCCAA GGCGGTCGAG
GATACGACCT TCTATCAGTA CAACCGGCTC GTGGCGCTCA ACGAGGTCGG CGCCGAGCCA
CAGCGCTTCG GCGTCTCGCT CGCGGCCTTC CATCGCGAGA ACCAGGAACG ATCCCGGCGC
TGGCCGCATG CGATGCTCGC GAGTTCGACG CACGATACCA AGCGCTCGGA AGACGTGCGG
GCGCGGCTGT GCGTGCTGTC GGAAGTCCCC GAACTGTGGC ATCAGGCCTT GTCGCGCTGG
AGCAACCTCA ACCGCAGCAA ACGGCGCCGG CTCGGCGAAT CGCGCGTGCC GAGCCGCAAC
GACGAATACC TGCTATACCA GACCCTGCTC GGCATCTGGC CGTTCGATGC GCCCGACGCC
GACACGCTCG CCAGCCTGGC GGCGCGCCTG CGGACCTACA TGCTGAAGGC CGTGCGCGAG
GGCAAGACCC ACAGCTCGTG GATCAGCCCC GACACGGCGT ACGAAGACGC GGTCGGCGAC
TTCGTCAGCG CGCTGCTGTC GGCGGACGCA GGCAACCTGT TCCTGCGCGA CTTCGCGCCC
TTCCAGGCCG GCGTCGCGCG TGCCGGCGCG TTCAACAGCC TGTCGCAACT GCTGCTCAAG
CTCGCCTCGC CGGGCGTGCC CGACGTTTAT CAGGGGTGCG AGATGTGGGA TTTCAGTCTG
GTCGACCCCG ACAACCGGCG ACCGGTCGAC TACGCACGGC GCCAGCGTGC GCTGCAGGCG
GTCAGGACGA TGCACGCGGA ACAGGGCGCG GCCGCCTGCA CGGAAGCCTT GCTCGCGCGC
CTGCAGGACG GCGAGATCAA GCTTTATCTC GTCTGGCGGC TGCTCGCATT TCGGCGTGCG
TACGAAGCCC TGTTCCGCGA GGGCGACTAT GTCCCGCTCA AGGTCCACGG TGCGCGCGCC
GAGCAGATTT GTGCCTTCTC CCGTCAGGCG GGAGGCGACG CGCTGGTGCT CGTGGTTCCG
CGGCTCATCG CACGCCTGGT GTGGGAGAGC GACGCGCTGC TGGTCGGTGA AGCGGTGTGG
GGAGACACCT GGATCGAACT GCCGCCGGAG CGGGTGCGTC CGGGTTGGGT CGACGTGCTG
ACCGAACGCG GCGTCGATAC GCGTGGCTTC GGTGATTCGA CCGGATTGTC GGTCGCGGAG
ACGCTGGCGA CAGTTCCGTT TGCCGTCCTG CACGCCGCGC CTGCCTAG
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| Protein sequence | MSTLLDQACE RCGILPEYYD IWGGAHPTSE AAKRALLEAM GVPAASDADL ARSLDELERR
EWSRALPPVV VVREPERPYR VPLVVAEADL GAGRRWKLRQ ESGGEIAGEF SPAALEEVAR
VTFDGVAYTR RTLVLAIEPG LGYHRFVVER ADGGGEACEM SFIVAPPACY QPPAIHGDGR
AWGIAAQLYG VRSERNWGIG DFGDLRHMLE FCADSGAGSV LLNPLHAMFP DAPEHASPYS
PSNRAYFNTL YLDVEEITDF GECEAVRAVV HAPHFQARLR ALRAADQVDY RGVADAKAEV
LRELYAHFRA EHLARESARG REFRAFQAAH GNSLRSQALF EALQTHFRNE DGAVWGWPVW
PEAYRTREAP EVSAFGEANL EQVEYFEYLQ WQASLQLRAA GTRSWELGLG VGVMLDLAIG
VAEGGAATWM CRDLYAFGAS AGAPPDEFNR LGQDWGLPPW IPHRLKARAY EPFIELIRAN
MRDSGALRLD HVMGLFRLFW VARGLPISQG AYVAYPFRDL LGILALESQR NRCLVVGEDL
GTVPEEVRAV LQPMEVLSTR LLYFERQENG RLAPPGSYPA NAVAAVTTHD LPTLAGYWRG
LDIDLREQLR LFPDAEVRNQ QVIARSEDRA QLLVALEGEQ VLPPGGVQPV AFPELTTELA
VAVYTYLGRA PSKLLLLQLE DGFGVHEQPN LPGTVSPTYP CWRLKIPINL EEWRSSEPLQ
GIMQALRQER PVTQVAGPAG AGMEEGVRLW IPRATYRLQL NRDFKLPQAM ALLPYLDALG
ISHCYLSPIL KARPGSRHGY DITDHSSLNP EIASAEDFEQ FVAEIKRRGM GQIMDLVPNH
MGINGADNAW WLDVLENGPA SRYATYFDID WYSNTADMSG RVLLPVLGEH YGAVLDKGEL
KLVFDPEDGA FSVFYYEHRF PVDPREYPRI LGHGLERLQA RLGAEDIVLL EFQALVTTFG
HLPARDRVTP EAVAERSRDK EVHKHRLAAL YAGSADVARF IDENLAEFNG IGQAGANFDL
LHELLQSQAY RLAFWRVAAD EINYRRFFDI NDLAALRMDN PEVFEATHRL LHELLGRGYI
NGLRIDHPDG LYAPKAYFER LQAMAATLMP KVGNGHAEST PRPLYLIVEK ILAVHEHLPE
SWAVHGTTGY DFAAACTGLF VDASAADAFT RTYQGFIRAR PAYEEMVRAN KHLIMQTSLA
GELQVLATQL TRLAKEDRCT CDFTLNSLRS AIAEIVASFP VYRTYVTPGE TSADDVRYVD
WAVGVAKKRS RADPSIFDFV RDAMLGRLGR VDRDDYREAV AAFAMKFQQY SSPVTAKAVE
DTTFYQYNRL VALNEVGAEP QRFGVSLAAF HRENQERSRR WPHAMLASST HDTKRSEDVR
ARLCVLSEVP ELWHQALSRW SNLNRSKRRR LGESRVPSRN DEYLLYQTLL GIWPFDAPDA
DTLASLAARL RTYMLKAVRE GKTHSSWISP DTAYEDAVGD FVSALLSADA GNLFLRDFAP
FQAGVARAGA FNSLSQLLLK LASPGVPDVY QGCEMWDFSL VDPDNRRPVD YARRQRALQA
VRTMHAEQGA AACTEALLAR LQDGEIKLYL VWRLLAFRRA YEALFREGDY VPLKVHGARA
EQICAFSRQA GGDALVLVVP RLIARLVWES DALLVGEAVW GDTWIELPPE RVRPGWVDVL
TERGVDTRGF GDSTGLSVAE TLATVPFAVL HAAPA
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