Gene Tbd_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1171 
Symbol 
ID3671532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1223183 
End bp1223755 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content64% 
IMG OID637709855 
Producthypothetical protein 
Protein accessionYP_314929 
Protein GI74317189 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGC TGCTTGTCTC CGCTGCGCTG GCATCGGCCA TGGCCATGTC GGCGCCGGCA 
ACCGCCGGTT TCTTCGATTT CACGCTCGCC CCGTACGTCG GCGCGAGTGC CGGCGAATCG
ACGACCGATT CCTGCATCAC GGGTACCTGC GACGACGCCG ATACCGCCTG GAAAATCTAC
GGCGGTCTCG AAGTCAACGA ATTCATCTCG ATGGAAGTCG GCTATGTCGA ACTCGGCGAA
GTCGAGTACA GCGCGCCGAC CGGCACCCGC GGCACCCACG GCATGATCCT GCAGCTCGTC
GGTTCCTACG CGCTCGGCCC GAAGTTCACG CTGCTCGGCC GCGGCGGCAT GAACATCCTG
AATACCGAAG TCGAGGGCGC GGTTGCAGGC GCGCGGGGCA ACGAGGGCGA CACCGACGTC
TCGTGGTCGC TGGGTCTCGG CGCGCAATAC AACCTCACCA AATCGGTCGG CCTGCGCGTC
GAATGGGAAC GCTACTTCGA AGTCGGCGAC CCGGACAGCA CGGGCGAAGC CGATATCGAT
CTCCTTACCG CTGGCGTCGT CTTCAAATTC TGA
 
Protein sequence
MRKLLVSAAL ASAMAMSAPA TAGFFDFTLA PYVGASAGES TTDSCITGTC DDADTAWKIY 
GGLEVNEFIS MEVGYVELGE VEYSAPTGTR GTHGMILQLV GSYALGPKFT LLGRGGMNIL
NTEVEGAVAG ARGNEGDTDV SWSLGLGAQY NLTKSVGLRV EWERYFEVGD PDSTGEADID
LLTAGVVFKF