Gene Tbd_1168 details

Gene Information

• Locus tag: Tbd_1168
• Symbol: hscA
• ID: 3671585
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiobacillus denitrificans ATCC 25259
• Kingdom: Bacteria
• Replicon accession: NC_007404
• Strand: +
• Start bp: 1220644
• End bp: 1222506
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637709852
• Product: chaperone protein HscA
• Protein accession: YP_314926
• Protein GI: 74317186
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCCTGC TGCAGATTTC CGAACCTGGC ATGTCGAGCG CGCCGCATCA GCATCGCCTC 
GCCGTCGGCA TCGACCTCGG GACGACCAAC ACGCTCGTGG CGACGGTGCG CTCGGGCCTT 
GCCGTCGTGC TCGACGACGA GGCGGGGCGC TCGCTTCTGC CTTCGGTCGT GCGCTACCGT 
CCCGACGGTG CCATCGACGT CGGCTATCCC GCGCAGGCCG CGCAAAACGT CGATCCGCAC 
AACACCATCG TTTCGGTGAA ACGCTTCATG GGCCGCGGCA TCGCCGACAT CGACGACATC 
GCCAGTCTGC CGTATCGCTT CGTCGACGCG CCGGGCATGG TGCAGCTCAA GACCGCTGCC 
GGCGTGAAGA GCCCGGTCGA AATCTCGGCC GAGATCCTGA AACTGATGCG CGAGCGCGCC 
GAAGCGTCGA TGGGCGGCGA ACTGGTCGGC GCGGTGATCA CGGTGCCGGC CTATTTCGAC 
GACGCTCAGC GCCAGGCGAC CAAGGACGCC GCGCAACTCG CCGGCCTCAA TGTACTGCGC 
CTGTTGAACG AACCCACGGC GGCCGCGATC GCCTATGGCC TCGACAATGC GTCCGAAGGC 
GTCTACGCGG TATACGACCT CGGCGGCGGC ACCTTCGATA TTTCGATTCT CCGCCTCGCG 
CGCGGCGTTT TTGAGGTGCT CGCAACGAAT GGCGACTCGG CGCTCGGTGG CGACGATTTC 
GACCAGCGCG TGTTCTGCTG GATGCTCGAG CAGGGCCGTT TTGCCCCGCT CTCCGCGAGC 
GACGCGCGCC TGCTGCTGAC CAAGGCGCGC GACGCCAAGG AGGCCTTGAC CGAACACAGC 
GAGGTCCGCG TCACCGCTGT GCTGTCGACC GGTGAAATGA TGGACGCGAC GCTGACGCAG 
CGCGATTTCA ACGCCATGAC CGCGAGTCTC GTAGCGAAGA CGCTCGCGCC CACGCGCAAG 
GCGCTGCGCG ACGCCGGCCT GGCGGCGGAC GAGGTCAAGG GCGTCGTCAT GGTCGGCGGC 
TCGACGCGCA TGCCGTGCAT CCGCCAGGCG GTCGCCGATT TCTTCAAGCA GACGCCGCTC 
ACCAACCTCG ACCCCGACAA GGTCGTCGCG CTCGGCGCGG CGATGCAGGC CGACGTGCTG 
GCAGGCAACC GCGGCGGCGA CGACTGGCTG CTGCTCGACG TGATCCCGCT GTCGCTGGGT 
CTGGAGACCA TGGGTGGGCT GACCGAGAAG GTGATTCCGC GCAACACGAC GATTCCGACC 
GCGCGCGCCC AGGATTTCAC GACCTTCAAG GATGGCCAGA CGGCGATGAG CGTGCACGTG 
CTGCAGGGCG AGCGTGAACT CGCGGCGAAC TGCCGCTCGC TGGCGCGGTT CGAGCTGCGC 
GGCATCCCGC CGATGGTCGC GGGCGCCGCG CGCATCCGCG TGACCTTCCA GGTCGACGCC 
GACGGTCTGC TCGCCGTGTC GGCGCGCGAA CAGAGCACAG GCGTCGAGGC GAGCATCCAG 
GTCAAGCCTT CGTACGGGCT CGCCGATGAA GACATCACGC GCATGCTGAA GGACGCGTTC 
ACGCACGCGA AGGACGACAT GTACGCGCGT GCGCTCAACG AGCAGATCGT CGAAGCCCAG 
GGCCTGATTG CCGCGACCCG CGCCGCGCTC GCCGAAGACG GCGCACTGCT GGACGATGCG 
GAGATGGCGG CGATCGAGGC GGGCATCGCC GGCCTTGAAA AATTGATGGC GGGTCCCGAT 
CATCAGGCGA TCAAGCGCGG CATCGAGGCG CTGAACGCCA CGACGACCGG CTTCGCCCAG 
CGTCGCATGG ACCGCAACGT GCGACGCGCG ATGGCCGGCC AGAAGCTCGA AACCTTCGAT 
TGA 

 

Protein sequence

MALLQISEPG MSSAPHQHRL AVGIDLGTTN TLVATVRSGL AVVLDDEAGR SLLPSVVRYR 
PDGAIDVGYP AQAAQNVDPH NTIVSVKRFM GRGIADIDDI ASLPYRFVDA PGMVQLKTAA 
GVKSPVEISA EILKLMRERA EASMGGELVG AVITVPAYFD DAQRQATKDA AQLAGLNVLR 
LLNEPTAAAI AYGLDNASEG VYAVYDLGGG TFDISILRLA RGVFEVLATN GDSALGGDDF 
DQRVFCWMLE QGRFAPLSAS DARLLLTKAR DAKEALTEHS EVRVTAVLST GEMMDATLTQ 
RDFNAMTASL VAKTLAPTRK ALRDAGLAAD EVKGVVMVGG STRMPCIRQA VADFFKQTPL 
TNLDPDKVVA LGAAMQADVL AGNRGGDDWL LLDVIPLSLG LETMGGLTEK VIPRNTTIPT 
ARAQDFTTFK DGQTAMSVHV LQGERELAAN CRSLARFELR GIPPMVAGAA RIRVTFQVDA 
DGLLAVSARE QSTGVEASIQ VKPSYGLADE DITRMLKDAF THAKDDMYAR ALNEQIVEAQ 
GLIAATRAAL AEDGALLDDA EMAAIEAGIA GLEKLMAGPD HQAIKRGIEA LNATTTGFAQ 
RRMDRNVRRA MAGQKLETFD