Gene Tbd_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1164 
Symbol 
ID3673236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1217940 
End bp1219148 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content65% 
IMG OID637709848 
Productcysteine desulfurase IscS 
Protein accessionYP_314922 
Protein GI74317182 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000196201 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA TTTACTTCGA CTATTCCGCC ACCACTCCGG TCGATCCGCG CGTCGCCGAC 
AAGATGATCC CGTACCTGAC CGAGCACTTC GGCAATCCGG CGTCGCGCTC GCATCCATTC
GGCTGGGAAG CCGAGGCTGC CGTCGAGGCG GCGCGCGGCC ATATCGCGGC GCTGGTGGGC
GCGGACCCGA AGGAAATCGT GTTCACCTCG GGCGCCACCG AGTCTAACAA CCTCGCCATC
AAGGGCGCCG GCCATTTCTA CTCGGGCACC AAGGGCAAGC ACATCATCAC CGTCCGCACC
GAGCACAAGG CCGTGCTCGA CACCGTGCGC GAGATGGAGC GCCAGGGTTT CGAGGCGACT
TATCTCAACG TCAAGGAAAA CGGCCTGCTC GACCTCGACG AGTTTCGCGC CGCGATCCGT
CCCGACACGG TGCTGGCGTC GGTGATGGCG GTCAACAACG AGATCGGCGT GATCCAGGAT
ATCGACGCGC TCGGCAAGAT CTGCCGCGAG AAGGGCGTGG TGTTCCACGT CGACGCGGCG
CAGGCGACCG GCAAAATGCC GATCGACCTG AAGACGCTGC CGGTCGATCT GATGTCGTTC
TCGGCGCACA AGACCTACGG CCCCAAGGGC ATCGGCGCCC TGTACGTGCG CCGCAAGCCG
CGCATCCGCC TCGAGGCCCA GATGCACGGC GGCGGGCACG AGCGCGGCAT GCGTTCGGGC
ACGCTCGCGA CGCACCAGAT CGTCGGCATG GGTGAAGCCT TCCGCATCGC CCGCGAGGAA
ATGGCGACCG AGAACGAGCG TATCCGCATG CTCCGCGACC GCCTCTATGC GGGCCTCAAG
GATATCGAGG AAGTGCACCT GAACGGCGAC CTCGATCGCC GCGTGCCGCA CAACCTCAAC
GTCAGCTTCA ACTTCGTCGA GGGCGAGTCG CTGATCATGG CGATCAAGGA CCTGGCTGTC
TCGTCGGGTT CGGCCTGCAC CTCGGCGAGC CTCGAGCCGT CCTACGTGTT GCGCGCGCTC
GGCCGCAGCG ACGAGCTCGC GCACAGCTCG ATCCGCTTCT CGATCGGCCG CTTCACGACC
GAGCAGGAAG TGGACTACGC GATCAAGCTC CTGCACGAGA AGATCGGCAA GCTGCGCGAA
CTGTCCCCGC TGTGGGAAAT GTTCAAGGAA GGCATCGATC TCAATACTGT GCAGTGGGCG
GCACACTGA
 
Protein sequence
MKTIYFDYSA TTPVDPRVAD KMIPYLTEHF GNPASRSHPF GWEAEAAVEA ARGHIAALVG 
ADPKEIVFTS GATESNNLAI KGAGHFYSGT KGKHIITVRT EHKAVLDTVR EMERQGFEAT
YLNVKENGLL DLDEFRAAIR PDTVLASVMA VNNEIGVIQD IDALGKICRE KGVVFHVDAA
QATGKMPIDL KTLPVDLMSF SAHKTYGPKG IGALYVRRKP RIRLEAQMHG GGHERGMRSG
TLATHQIVGM GEAFRIAREE MATENERIRM LRDRLYAGLK DIEEVHLNGD LDRRVPHNLN
VSFNFVEGES LIMAIKDLAV SSGSACTSAS LEPSYVLRAL GRSDELAHSS IRFSIGRFTT
EQEVDYAIKL LHEKIGKLRE LSPLWEMFKE GIDLNTVQWA AH