Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1164 |
Symbol | |
ID | 3673236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1217940 |
End bp | 1219148 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637709848 |
Product | cysteine desulfurase IscS |
Protein accession | YP_314922 |
Protein GI | 74317182 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000196201 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGA TTTACTTCGA CTATTCCGCC ACCACTCCGG TCGATCCGCG CGTCGCCGAC AAGATGATCC CGTACCTGAC CGAGCACTTC GGCAATCCGG CGTCGCGCTC GCATCCATTC GGCTGGGAAG CCGAGGCTGC CGTCGAGGCG GCGCGCGGCC ATATCGCGGC GCTGGTGGGC GCGGACCCGA AGGAAATCGT GTTCACCTCG GGCGCCACCG AGTCTAACAA CCTCGCCATC AAGGGCGCCG GCCATTTCTA CTCGGGCACC AAGGGCAAGC ACATCATCAC CGTCCGCACC GAGCACAAGG CCGTGCTCGA CACCGTGCGC GAGATGGAGC GCCAGGGTTT CGAGGCGACT TATCTCAACG TCAAGGAAAA CGGCCTGCTC GACCTCGACG AGTTTCGCGC CGCGATCCGT CCCGACACGG TGCTGGCGTC GGTGATGGCG GTCAACAACG AGATCGGCGT GATCCAGGAT ATCGACGCGC TCGGCAAGAT CTGCCGCGAG AAGGGCGTGG TGTTCCACGT CGACGCGGCG CAGGCGACCG GCAAAATGCC GATCGACCTG AAGACGCTGC CGGTCGATCT GATGTCGTTC TCGGCGCACA AGACCTACGG CCCCAAGGGC ATCGGCGCCC TGTACGTGCG CCGCAAGCCG CGCATCCGCC TCGAGGCCCA GATGCACGGC GGCGGGCACG AGCGCGGCAT GCGTTCGGGC ACGCTCGCGA CGCACCAGAT CGTCGGCATG GGTGAAGCCT TCCGCATCGC CCGCGAGGAA ATGGCGACCG AGAACGAGCG TATCCGCATG CTCCGCGACC GCCTCTATGC GGGCCTCAAG GATATCGAGG AAGTGCACCT GAACGGCGAC CTCGATCGCC GCGTGCCGCA CAACCTCAAC GTCAGCTTCA ACTTCGTCGA GGGCGAGTCG CTGATCATGG CGATCAAGGA CCTGGCTGTC TCGTCGGGTT CGGCCTGCAC CTCGGCGAGC CTCGAGCCGT CCTACGTGTT GCGCGCGCTC GGCCGCAGCG ACGAGCTCGC GCACAGCTCG ATCCGCTTCT CGATCGGCCG CTTCACGACC GAGCAGGAAG TGGACTACGC GATCAAGCTC CTGCACGAGA AGATCGGCAA GCTGCGCGAA CTGTCCCCGC TGTGGGAAAT GTTCAAGGAA GGCATCGATC TCAATACTGT GCAGTGGGCG GCACACTGA
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Protein sequence | MKTIYFDYSA TTPVDPRVAD KMIPYLTEHF GNPASRSHPF GWEAEAAVEA ARGHIAALVG ADPKEIVFTS GATESNNLAI KGAGHFYSGT KGKHIITVRT EHKAVLDTVR EMERQGFEAT YLNVKENGLL DLDEFRAAIR PDTVLASVMA VNNEIGVIQD IDALGKICRE KGVVFHVDAA QATGKMPIDL KTLPVDLMSF SAHKTYGPKG IGALYVRRKP RIRLEAQMHG GGHERGMRSG TLATHQIVGM GEAFRIAREE MATENERIRM LRDRLYAGLK DIEEVHLNGD LDRRVPHNLN VSFNFVEGES LIMAIKDLAV SSGSACTSAS LEPSYVLRAL GRSDELAHSS IRFSIGRFTT EQEVDYAIKL LHEKIGKLRE LSPLWEMFKE GIDLNTVQWA AH
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