Gene Tbd_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1154 
SymbolnuoM 
ID3673226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1208591 
End bp1210075 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content62% 
IMG OID637709838 
ProductNADH dehydrogenase subunit M 
Protein accessionYP_314912 
Protein GI74317172 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.408177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGAC AGTCGATTCT TTCCCTCGTC ATCTGGGTCC CGATTCTTGC AGGTGCAGCG 
GTCCTCGCCA CGGGCTCCGA CCGCAACGCG CCGCTCGCGC GCTGGCTTGC GCTGCTGGGG
GCTGTGCTTG GCCTTGCGGT CGCGATCCCG CTGGTTACGG GTTTCGACAA CGCGACTTCG
GCGATGCAGT TCGTCGAGAA GAAAAGCTGG ATTCCGGCGT TCAACGTCTT CTACCACCTG
GGCGTCGACG GCATTTCGAT GCCGCTGATC CTGCTGAACA GCTTCGTCAC CGTGCTCGTC
GTCATCGCCG GCTGGCAGGT GATCCAGGAC AAGGTCGCGC AGTACATGGC AGCGTTCCTG
ATCATGTCGG GGCTCATCAA CGGCGCCTTC GCTGCGCTCG ACGGCATCCT GTTCTACGTC
TTCTTCGAAG GCATGCTGAT CCCGCTCTAC CTGATCGTCG GTGTCTGGGG CGGACCGAAC
CGCGTCTATG CCGCGTTCAA GTTCTTTCTC TATACCTTGC TCGGCTCGCT GCTGATGCTG
GTGTCGCTGA TCTATCTCTA TTTCCAGTCC GGCGGCAGCT TCGACATTCA GAGCTGGTAC
ACCACGCCGC TCAGCATGAC CGCGCAGACG CTGATGTTCT TCGCCTTTCT GCTCGCATTC
GGCGTCAAGG TCCCGATGTG GCCGGTGCAC ACCTGGTTGC CCGACGCGCA CGTCGAGGCG
CCGACCGGCG GTTCGGTCGT GCTCGCGGCG ATCACGCTCA AGGTCGGCGC CTACGGGCTC
GTGCGCTTCC TGTTGCCCAT CGTTCCCGAT GCGGCCCACG AATACGCCTG GTTCGTCATC
ACCCTGTCGT TGATCGCGGT CGCGTACATC GGCCTCGTTG CGCTCGTGCA GGCCGACATG
AAGAAGCTCA TCGCCTATTC GTCGATCGCC CACATGGGAT TCGTGACCCT CGGTTTCTTC
CTGTTCAACC CGCTCGGCTG GGAGGGCGGC CTGGTGCAGA TGATCTCCCA CGGCTTCGTC
TCGGCCGCGC TGTTCCTCTG CATCGGCGTG ATGTACGACC GCCTGCACTC GCGTCAGATC
AAGGATTACG GCGGCCTCGT CAATCGCATG CCGGTGTTCG CGGCCTTCTT CATGCTGTTC
GCGATGGCCA ATTCGGGGCT TCCGGCGACC AGTGGTTTCG TCGGCGAATT CATGGTCATC
ATGGCAGCCA CCGAGGTCAA TTTCTGGTTC GCCTTCGTCG CCGCGACGAC GCTGATCTTC
GGCGCGGCCT ACACACTCTG GATGTACAAA CGCGTCGTTT TCGGCAGCGT GACCAATTCG
CGCGTCGCCC AGATGCGCGA CGTGAACGCG CGCGAGATCC TGCTGCTCGG CCTCCTTGCC
CTGTTCGTGC TGGGGATGGG GCTCTATCCC AAACCCTTTA CCGACGTCAT GCATGCCTCT
GTCGTCGACC TGCTGGCGCA CGCCGCGCAG AGCAAGCTTC CGTGA
 
Protein sequence
MFGQSILSLV IWVPILAGAA VLATGSDRNA PLARWLALLG AVLGLAVAIP LVTGFDNATS 
AMQFVEKKSW IPAFNVFYHL GVDGISMPLI LLNSFVTVLV VIAGWQVIQD KVAQYMAAFL
IMSGLINGAF AALDGILFYV FFEGMLIPLY LIVGVWGGPN RVYAAFKFFL YTLLGSLLML
VSLIYLYFQS GGSFDIQSWY TTPLSMTAQT LMFFAFLLAF GVKVPMWPVH TWLPDAHVEA
PTGGSVVLAA ITLKVGAYGL VRFLLPIVPD AAHEYAWFVI TLSLIAVAYI GLVALVQADM
KKLIAYSSIA HMGFVTLGFF LFNPLGWEGG LVQMISHGFV SAALFLCIGV MYDRLHSRQI
KDYGGLVNRM PVFAAFFMLF AMANSGLPAT SGFVGEFMVI MAATEVNFWF AFVAATTLIF
GAAYTLWMYK RVVFGSVTNS RVAQMRDVNA REILLLGLLA LFVLGMGLYP KPFTDVMHAS
VVDLLAHAAQ SKLP