Gene Tbd_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1153 
SymbolnuoL 
ID3673225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1206570 
End bp1208579 
Gene Length2010 bp 
Protein Length669 aa 
Translation table11 
GC content63% 
IMG OID637709837 
ProductNADH dehydrogenase I chain L 
Protein accessionYP_314911 
Protein GI74317171 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 
TIGRFAM ID[TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATGG ACATGCAGAC GCTTTATCTG GTCGTGGCGC TCGCGCCGCT GGTCGGTGCG 
ATCATCGCCG GGCTGTTCGG CAGGCTCGTC GGCCGCGTCG GTGCGCACAC CGCGGCGATC
GCCGGGGTGG CCGTGTCGTT CATCGCCTCG GTACTCGTGT TCCAGGACGT GCTCGCGGGC
AACGTCTACA ACGGCACGGT CTACACGTGG ATGACGGTCG GCGAGCTACG TTTCGAAGTC
GGCTTCCTGA TCGATTCGCT GTCGGCGATG ATGATGCTGG TGGTGACCTT CGTCTCGCTC
ATGGTGCACG TCTACACCAT CGGCTACATG CACGACGACC CGGGCTACCA GCGTTTCTTC
AGCTACATCT CGCTCTTCAC CTTCTCGATG CTCATGCTCG TCATGAGCAA CAACTTCCTG
CAGCTGTTCT TCGGCTGGGA GGCGGTGGGC CTCGTTTCCT ATCTCCTCAT CGGCTTCTGG
TACACGAAGG AAACCGCGAT CTACGCCAAC CTCAAGGCGT TCCTCGTCAA CCGCGTGGGT
GACTTCGGTT TCATCCTCGG CATCGGCCTG GTCCTCGCGT ATTTCGGCTC CCTCGATTAC
GCCACGGTCT TTGCCAAGGC GCCCGCGCTC GCCGACGAGA CGATCACGCT GTGGCCGGAC
AGTCCGTGGA TGCTGATGAC CGTCATCGGC ATCCTGCTGT TCATCGGTGC GATGGGGAAA
TCGGCCCAGT TTCCGCTGCA CGTCTGGCTG CCCGATTCGA TGGAAGGCCC GACGCCGATT
TCGGCGCTGA TCCACGCCGC GACGATGGTC ACCGCCGGCA TCTTCATGGT CGCGCGCATG
TCGCCGTTGT ACGAACTGTC CGACGTCGCG CTGTCGTTCA TCATGATCAT CGGTGCCGTC
ACCGCGCTGT TCATGGGCCT GCTCGGCATC GTGCAGAATG ACATCAAGCG GGTCGTCGCG
TATTCGACGC TCTCGCAACT GGGCTACATG ACCGTCGCGC TCGGCGCGTC CGCGTATTCG
GTCGCGGTGT TCCACCTCAT GACGCACGCC TTCTTCAAGG CCTTGCTGTT CCTCGCCGCA
GGCAGCGTCA TCATCGCGCT GCACCACAAC CAGGACATCC GCTACATGGG CGGACTGAAG
AAATACATGC CGATCACCTG GATCACCTCG CTGATCGGGT CGCTCGCGCT GATCGGCACA
CCCTTCCTGT CGGGCTTCTA TTCCAAGGAA AGCATCATCG AAGCGGTCAG ACTCTCGCAC
CTGCCGACCG CACAGATTGC CTACTGGGCG GTGCTGATCG GCGTGTTCGT CACGGCCTTC
TATTCGTTCC GCATGTACTT CCTCGTATTC CACGGCAAGG AGCGTTTCCG CCAGGGTCAC
GCGCACGGCA ACGAGCCCGA CGCGCACGAC GATCACGGGC ATGGCCACGG CGGCACGCCG
CACGAAACCC CGTGGGTCGT GACCGGGCCA CTGCTGGCGC TCGCGCTGCC GTCGCTGGCG
ATCGGCTACA TGACAATCGA GCCGATGCTG TTCGGCGATT TCTTCGACCG GGCGATCTAC
GTCTCCGACC GCCACCCCGT GATGGTCGAG CTCAACCAGC ATTTCCATGG GGCGGCCGAA
ATGGGCCTCC ATGCGCTGGC GACACTGCCG TTCTGGCTGG CGGCAGCCGG CGTCGCGCTC
GCGGCCGTGT TCTACCTGCG GCGTCCCGAC ATCCCGGCGG CGCTCGCGCA GCGCTTCGCG
CCGATTCACC GCATGCTGCT CAACAAATAC TGGTTCGACG AGCTCTACAG CTGGGCGTTT
GCCAAGGGCG CGCGCGTCCT CGGCGGCTCG CTGTGGCGAC GCGGCGACCA GGCCTTCATC
GACGGCGTCC TCGTCAACGG CTCGGCGCAC GTGGTCGAGC GTGTCTCCCG TCTGACCAAG
CTTGTCCAGT CCGGCTACAT CTACCATTAC GCCTTCGCCA TGCTGATCGG GGTCGTCGCC
CTGGTGACCT GGTTCGCGCG GCTTAACTAA
 
Protein sequence
MRMDMQTLYL VVALAPLVGA IIAGLFGRLV GRVGAHTAAI AGVAVSFIAS VLVFQDVLAG 
NVYNGTVYTW MTVGELRFEV GFLIDSLSAM MMLVVTFVSL MVHVYTIGYM HDDPGYQRFF
SYISLFTFSM LMLVMSNNFL QLFFGWEAVG LVSYLLIGFW YTKETAIYAN LKAFLVNRVG
DFGFILGIGL VLAYFGSLDY ATVFAKAPAL ADETITLWPD SPWMLMTVIG ILLFIGAMGK
SAQFPLHVWL PDSMEGPTPI SALIHAATMV TAGIFMVARM SPLYELSDVA LSFIMIIGAV
TALFMGLLGI VQNDIKRVVA YSTLSQLGYM TVALGASAYS VAVFHLMTHA FFKALLFLAA
GSVIIALHHN QDIRYMGGLK KYMPITWITS LIGSLALIGT PFLSGFYSKE SIIEAVRLSH
LPTAQIAYWA VLIGVFVTAF YSFRMYFLVF HGKERFRQGH AHGNEPDAHD DHGHGHGGTP
HETPWVVTGP LLALALPSLA IGYMTIEPML FGDFFDRAIY VSDRHPVMVE LNQHFHGAAE
MGLHALATLP FWLAAAGVAL AAVFYLRRPD IPAALAQRFA PIHRMLLNKY WFDELYSWAF
AKGARVLGGS LWRRGDQAFI DGVLVNGSAH VVERVSRLTK LVQSGYIYHY AFAMLIGVVA
LVTWFARLN