| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1145 |
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| Symbol | nuoD |
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| ID | 3673217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1198545 |
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| End bp | 1199798 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637709829 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_314903 |
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| Protein GI | 74317163 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0197205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAA TCAGAAACTA CACGATGAAC TTCGGTCCGC AGCATCCGGC CGCGCACGGT
GTTCTGCGCC TCGTGCTGGA ACTGGACGGC GAAGTCATCC AGCGTGCCGA CCCGCACATC
GGGCTCCTGC ACCGTGCGAC CGAAAAGCTG GCGGAACACA AGACCTTCCT TCAGGCGCTC
CCGTACATGG ACCGTCTCGA CTACGTGTCG ATGATGGTCA ACGAGCACGC CTACGTCATG
GCGATCGAGA AGCTGCTCGG CATCGAGGTG CCCGAGCGCG CGCAATACAT CCGCGTGATG
TTCGACGAGA TCACCCGCGT CCTCAACCAC CTGCTGTGGC TCGGCGCGCA TGCGCTCGAC
GTCGGCGCGA TGACCGTGTT CCTCTACGCC TTCCGCGAGC GCGAAGACCT CATGGACTGC
TACGAGGCGG TGTCCGGGGC GCGCATGCAC GCGGCGTACT ACCGGCCTGG CGGCGTCTAC
CGCGACCTGC CCGACCGCAT GCCGCAGTAT CAGGCGCAGC ACACGCGCAA CGAGTCGACG
ATGAAGTCGA TGAACGCGAA CCGACAGGGT TCGCTGCTCG ATTTCATTGA GGATTTCACG
ACCCGCTTCC CGGCTTACGT TGACGAGTAC GAAACCCTGC TGACCGACAA CCGCATCTGG
AAGCAGCGCA CCGTCGGCAT CGGCGTCGTC GCCCCGGAAC GGGCGCTGGC CCTGGGTTTT
ACCGGGCCCA TGCTGCGCGG TTCCGGCGTC GAGTGGGATC TGCGCAAGAA GCAGCCCTAC
GAAGTGTACG AGCGCATGGA TTTCGACATC CCGGTCGGGA CCAACGGCGA CTGCTACGAC
CGCTACCTGG TGCGCATCGA GGAGATGCGC CAGTCCAACC GCATCATCAG GCAATGCGTC
GACTGGCTGC GCAAGAACCC CGGCCCGATT ATGGTCGACA ACCACAAGGT CTCGCCGCCG
CCGCGGGTCG ACATGAAGCA GAACATGGAA GAGCTGATCC ACCATTTCAA GCTCTTCACC
GAGGGCATGC ACGTGCCCGC CGGGGAAGCC TACGCCGCGG TCGAACACCC CAAGGGCGAG
TTCGGCATCT ATCTCGTCTC CGACGGTGCG AACAAGCCTT ACCGCATGAA GATTCGCGCG
CCCGGCTTCG CCCATCTCGA GGCGCTCGAC GAGATGAGCC GCGGGCACAT GATTGCCGAC
GTCGTCGCGA TCATCGGGAC GCAGGATATC GTTTTCGGGG AGATCGATCG TTGA
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| Protein sequence | MAEIRNYTMN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AEHKTFLQAL
PYMDRLDYVS MMVNEHAYVM AIEKLLGIEV PERAQYIRVM FDEITRVLNH LLWLGAHALD
VGAMTVFLYA FREREDLMDC YEAVSGARMH AAYYRPGGVY RDLPDRMPQY QAQHTRNEST
MKSMNANRQG SLLDFIEDFT TRFPAYVDEY ETLLTDNRIW KQRTVGIGVV APERALALGF
TGPMLRGSGV EWDLRKKQPY EVYERMDFDI PVGTNGDCYD RYLVRIEEMR QSNRIIRQCV
DWLRKNPGPI MVDNHKVSPP PRVDMKQNME ELIHHFKLFT EGMHVPAGEA YAAVEHPKGE
FGIYLVSDGA NKPYRMKIRA PGFAHLEALD EMSRGHMIAD VVAIIGTQDI VFGEIDR
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