Gene Tbd_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1135 
Symbol 
ID3673206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1190402 
End bp1191778 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content67% 
IMG OID637709818 
Productphosphoglucosamine mutase 
Protein accessionYP_314893 
Protein GI74317153 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCGTA AATACTTCGG TACCGACGGG GTCCGCGGCA AGGTCGGCGA AACGCCGATC 
ACGCCCGAGT TCGTCATGCG TCTCGGCTAC GCGGCCGGCA AGGTGTTGGT GTCCGACCGC
GGGAGCTTGC CCGCGAACGA GCATCCGACC GTGCTGATCG GCAAGGACAC GCGCATTTCC
GGCTACATGC TCGAGGCGGC ACTCGAAGCA GGCTTCACGG CGGCCGGCGT GAACGTTCTC
ATGACCGGTC CGATGCCGAC CCCCGCCGTC GCCTACCTGA CGCGTGCGCT ACGCCTGCAG
GCTGGCGTCG TGATCTCCGC CTCGCACAAT CCCTTCGAGG ACAACGGCAT CAAGTTCTTT
TCGGCGAGCG GGCAGAAGCT CCCCGACAGC GTCGAGGAAG CGATCGAGGC TGCGCTCGAC
CAGCCGCTCG CGACCGTCGC GGCGCGCCAG CTCGGGCGCG CGCGGCGAAT CGAGGATGCG
GCCGCGCGCT ACATCGAATT CTGCAAGAGC ACCTTTCCCA ACCGGCTCGA CCTGCGCGGC
ATGCGCATCG TCGTCGACTG CGCGCACGGC GCGACCTACC ACGTCGCCCC CCATGTGCTG
CACGAACTCG GCGCGGAAGT CGTGGCCATT GGCAACGAGC CCAACGGCTT CAACATCAAC
GAAGCCTGCG GCGCGACGCA TACGCCGGCG CTGGCCGACG CGGTTCGCGC GCATCACGCC
GACATCGGGA TATCGCTCGA CGGTGACGGC GACCGCCTGA TGATGGCCGA TGCCCACGGC
CGGATCTACG ACGGCGACCA ACTCGTTTAC GTGATCGCGC GCCACCGCCT CGAGACGGGC
TACATGAAGG GCGGCGTGGT CGGCACGCTG ATGACCAATC TGGGTACCGA GCATGCGCTC
GCGCGCATTC ACGTGCCCTT CGAGCGCGCG AAGGTGGGCG ATCGCTACGT GCTCAAGCGT
CTCCATGCCA ACGGCTGGTT CCTCGGCGGT GAGACGTCGG GGCATATCCT CTGCCTCGAC
AAGCACACGA CCGGTGACGG CATCGTCTCG AGCCTGCAGG TGCTGCGCGC GCTGCGCGAG
ACCGGCAAAA CGCTCGACGC CTTCACCGCC GACCTGGAAA CCTATCCGCA GGTCATGATC
AACGTGCCCG TCGTCAAGGG ATTCAGGCTT AGTGACGCGG CGGCCGTCAC CGTTGCCGTT
GCCGATGCGG AGTCTGCGTT GAATGGCAGC GGTCGCATCG TGCTGCGTGC GTCCGGTACC
GAACCGCTGA TCCGGGTGAT GGTGGAGGGT CGCGACGGCG ACCTCGTCCG CCGCACCGCC
GAGATGATCG CGGACGCGGT ACGAGCGGCC GCGGCGGCGA GCGATATCGC GGTCTGA
 
Protein sequence
MGRKYFGTDG VRGKVGETPI TPEFVMRLGY AAGKVLVSDR GSLPANEHPT VLIGKDTRIS 
GYMLEAALEA GFTAAGVNVL MTGPMPTPAV AYLTRALRLQ AGVVISASHN PFEDNGIKFF
SASGQKLPDS VEEAIEAALD QPLATVAARQ LGRARRIEDA AARYIEFCKS TFPNRLDLRG
MRIVVDCAHG ATYHVAPHVL HELGAEVVAI GNEPNGFNIN EACGATHTPA LADAVRAHHA
DIGISLDGDG DRLMMADAHG RIYDGDQLVY VIARHRLETG YMKGGVVGTL MTNLGTEHAL
ARIHVPFERA KVGDRYVLKR LHANGWFLGG ETSGHILCLD KHTTGDGIVS SLQVLRALRE
TGKTLDAFTA DLETYPQVMI NVPVVKGFRL SDAAAVTVAV ADAESALNGS GRIVLRASGT
EPLIRVMVEG RDGDLVRRTA EMIADAVRAA AAASDIAV