| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1133 |
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| Symbol | |
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| ID | 3673204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1187620 |
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| End bp | 1189512 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637709816 |
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| Product | membrane protease FtsH catalytic subunit |
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| Protein accession | YP_314891 |
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| Protein GI | 74317151 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0177636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAACT TGTCGAAGAA CGTCGCCATC TGGTTGATCA TCGCTGTCAT CCTGATGACG
GTCTTCAACC AATTCGGCGC GCAGCGCAGC GCCCAGTCGC AGATTCCTTA TTCGCAATTC
ATCGAGGAAG TGCGGCAGCA GCAGATCGCC AAAGTGGTGA TCGAGGGCAA CGTGCTGAAG
GGCGAGCGCA GCGATGGCCA GCGCTTCACG AGTTATGCGC CGAGCGATCC GTGGATGGTG
TCGGATCTGC TGAAAAATGG CGTCATGGTC GAGGCCAAGC CCGAGGAGCA GCCGTCCTTC
CTGATGAGCC TCTTCATCTC GTGGTTCCCG ATGCTGCTGC TGATCGGCGT GTGGATCTTC
TTCATGCGTC AGATGCAGGG CGGCGGACGC GGCGGCGCGT TCTCGTTCGG CAAGAGCCGC
GCGCGCCTGC TCGACGAGAA CGCCAACCCG GTGACCTTCG CGGACGTCGC CGGCTGCGAC
GAAGCGAAGG AAGATGTCGC CGAACTGGTC GACTTCCTCA AGGATCCGTC CAAGTTCCAG
AAACTCGGCG GCCGCATTCC GCGCGGCGTG TTGATGGTCG GTCCGCCCGG CACGGGCAAG
ACGCTGCTCG CGCGCTCGAT CGCCGGGGAG GCGAAGGTGC CGTTCTTCAG CATTTCGGGC
TCCGATTTCG TCGAGATGTT CGTCGGCGTC GGCGCCGCGC GCGTGCGCGA CATGTTCGAA
CAGGCGAAGA AGAACGCACC GTGCATCATC TTCATCGACG AAATCGACGC CGTGGGCCGT
CAGCGCGGCG CCGGCCTCGG CGGCGGCAAC GACGAGCGCG AGCAGACGCT CAACCAGCTG
CTGGTGGAGA TGGACGGCTT CGAGGCGACG ACTGGCGTCA TCGTGATCGC GGCGACCAAC
CGCCCCGACG TGCTCGACCC CGCGCTGCTG CGCCCCGGCC GTTTCGACCG CCAGGTCGTG
GTCGGCCTGC CGGACATTCG TGGACGCGAG CAGATCCTGC TCGTGCACAT GCGCAAGGTG
CCGGTCGCAC CCGACGTCCG TGCCGACATC CTCGCGCGCG GCACGCCCGG CATGTCCGGC
GCCGACCTCG CCAACCTTGT GAACGAGGCG GCACTGTTTG CGGCCCGGGG CAACAAGCGC
CTCGTCGATA TGGACGATTT CGAGCAGGCC AAGGACAAGA TCCTGATGGG CGCCGAGCGC
AAATCCATGG TCATCACGCC CGAGGACAAG AAGAAGACGG CTTACCACGA GTCGGGCCAC
GCGGTGATCG GCATGTCCTT GCCTGGCTGT GACCCGGTAC ACAAGGTGAC CGTGATCCCT
CGCGGGCGCG CCCTGGGCGT GACGATGTCG CTGCCCGAAA TCGACCGCTT CAGCCTGTAC
AAGGACCAGA TGCTGGCGCA GATCAGCATG CTGTTCGGTG GACGCGTCGC CGAAGAAATC
TTCGTCGGCA GCGTCTCGAC CGGGGCATCG AACGACTTCG AGCGTGCGAC GAGCATCGCC
CGCGACATGG TGACGCGCTA CGGCATGTCG GAAGCGCTGG GACCCATGGT CTATGGCGAA
AACGAGGGCG AAGTCTTCCT CGGCCGCTCG GTGACGACGC ACAAGAACAT GAGCGAGGCG
ACGATGCAGA AGGTCGACGC CGAAATCCGC CGCATTCTCG ACGAGCAATA CGACGTCGCG
CGCAAAATCC TCACCGACAA CCGCGACAAG GTCGAGGCGA TGACGGCCGC GCTGCTCGAG
TTCGAGACGA TCGATGCGGA GCAGATCGCC GACATCATGG CCGGTCGTCC GGTCCGTCCG
CCGCGGCCTT CCGCGCCGCC GCAGCCGCCC GCGAGCGGGG GAGACAAGCC CAGCGCACCT
GCGCCCACGG CGCACCCGGC GCAGGAAACC TAG
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| Protein sequence | MNNLSKNVAI WLIIAVILMT VFNQFGAQRS AQSQIPYSQF IEEVRQQQIA KVVIEGNVLK
GERSDGQRFT SYAPSDPWMV SDLLKNGVMV EAKPEEQPSF LMSLFISWFP MLLLIGVWIF
FMRQMQGGGR GGAFSFGKSR ARLLDENANP VTFADVAGCD EAKEDVAELV DFLKDPSKFQ
KLGGRIPRGV LMVGPPGTGK TLLARSIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE
QAKKNAPCII FIDEIDAVGR QRGAGLGGGN DEREQTLNQL LVEMDGFEAT TGVIVIAATN
RPDVLDPALL RPGRFDRQVV VGLPDIRGRE QILLVHMRKV PVAPDVRADI LARGTPGMSG
ADLANLVNEA ALFAARGNKR LVDMDDFEQA KDKILMGAER KSMVITPEDK KKTAYHESGH
AVIGMSLPGC DPVHKVTVIP RGRALGVTMS LPEIDRFSLY KDQMLAQISM LFGGRVAEEI
FVGSVSTGAS NDFERATSIA RDMVTRYGMS EALGPMVYGE NEGEVFLGRS VTTHKNMSEA
TMQKVDAEIR RILDEQYDVA RKILTDNRDK VEAMTAALLE FETIDAEQIA DIMAGRPVRP
PRPSAPPQPP ASGGDKPSAP APTAHPAQET
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