Gene Tbd_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1123 
Symbol 
ID3673194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1178421 
End bp1178867 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content61% 
IMG OID637709806 
Productferric uptake regulator family protein 
Protein accessionYP_314881 
Protein GI74317141 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.488583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAATC CGACCGACCT CAAGAGCATC GGCCTCAAGG CCACCTTGCC GCGCCTGAAA 
ATTCTCGATC TGTTCGAGCA GAGCAACAAG CGCCACTTGA GCGCGGAGGA AATCTACCGC
CTGCTCTCCG ACGAAGGCCA GGACATCGGG CTCGCCACGG TCTATCGCGT GCTGACCCAG
TTCGAGCAGG CCGGCCTGTT GATGCGCCAT CATTTCGACA GCGACAAGGC CGTGTTCGAA
CTGAACCAGG GCGACCACCA CGACCACCTG GTCTGCCTGC AGTGCGGCAA GGTCGAGGAG
TTCGTCGACG CCGAGATCGA AAAGCGGCAA CAGCGCATCG CAAAGGAACG CGGCTTCGCG
ATCCACGACC ACTCGCTGCA GATCTACGCC GATTGCATCA AGGAAAACTG CCCCAACCGC
AAGTCCGTCG ACCGTCAGCG GCCGTAA
 
Protein sequence
MSNPTDLKSI GLKATLPRLK ILDLFEQSNK RHLSAEEIYR LLSDEGQDIG LATVYRVLTQ 
FEQAGLLMRH HFDSDKAVFE LNQGDHHDHL VCLQCGKVEE FVDAEIEKRQ QRIAKERGFA
IHDHSLQIYA DCIKENCPNR KSVDRQRP