Gene Tbd_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1117 
Symbol 
ID3673188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1173738 
End bp1174388 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID637709800 
Productacyl carrier protein phosphodiesterase 
Protein accessionYP_314875 
Protein GI74317135 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCA CGCCCGTCCC GTCCCTTCAA TCCTCACTTC GCGTACTGCG CGTCGACGCG 
AGTGCCCGCG TCGACGATTC CGTCACCCGC CGCCTGGCCG ACCTCATGCT CGAGATATTG
GGCGAACGGG TGCCCGACCT GTCGGTCGTC CGGCGCGAAG CAGCGGGCAT GCCCTTCGTC
GATGACGCTT GGGTCGGCGC CAATTCGACG GACCCTGAAG CGCGCGATTC CGCGCAACGC
TGGGCCCTGG CGAAATCGGA CGAACTCGTG AGCGAAGTGA TGGCCGCGGA TGTATTGGTG
ATCGCTACCC CGATCTACAA CTTCGGCGTG CCCGCCAGTC TCAAGGCCTG GGTCGACCAG
GTCGCGCGCG CCAGGCTGAC CTTCCGCGAC ACCGAGTACG GCCCGGAGGG GCTGCTGACC
GGCAAGAAGG CTTATGTCCT CGTGGCGAGC GGCGGTACCG AAGTCGGGAG CGACATTGAC
TTCGCGACGC CGTGGCTGGA GTTCGTGCTG GGCTTCCTCG GTATCACCGA CGTCGAGGTG
ATCGCGGCCG ATCGCGGCAT GTTGCGCGGC GACAGCGCTC GGCAGAACGC TGCCGAACAC
GTCGCCGACG TGCTGGAACG CGACTGGCCG GCGCTGGCCG AGGCGAGCTG A
 
Protein sequence
MQATPVPSLQ SSLRVLRVDA SARVDDSVTR RLADLMLEIL GERVPDLSVV RREAAGMPFV 
DDAWVGANST DPEARDSAQR WALAKSDELV SEVMAADVLV IATPIYNFGV PASLKAWVDQ
VARARLTFRD TEYGPEGLLT GKKAYVLVAS GGTEVGSDID FATPWLEFVL GFLGITDVEV
IAADRGMLRG DSARQNAAEH VADVLERDWP ALAEAS