Gene Tbd_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1114 
Symbol 
ID3673185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1171040 
End bp1171957 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID637709797 
Productcation efflux protein 
Protein accessionYP_314872 
Protein GI74317132 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCT CCCTCAAACG CTATGCCTGG CTTTCGATCG CCGCCGCGGT GGCCACGATC 
CTCCTCAAGG GCTCGGCATG GTGGCTCACG GGATCGGTCG GCCTGCTCTC GGACGCCCTC
GAATCCTTCG TCAACCTCGC CGGCGCGATG ATGGCGCTGG CGATGCTTTC GCTCGCGGCG
CAGCCGGCCG ACGACAACCA CGCGCATGGC CACGGCAAGG CCGAATATTT CTCGAGCGCG
TTCGAAGGTT TCCTGATTCT CGTCGCCGCC ATGAGCATCG GCTACGCCGC GGTCGAGCGC
CTGCTGAATC CGCAGCCGCT CGAGACGGTC GGAATCGGAC TCGCGATCTC GGTCATCGCG
TCGATCATCA ATCTCGTCAC CTCGCGCGTC CTCTTGGGCG TCGGCCGCAA ATACAAGTCG
ATCACGCTCG AGGCGGACGC GCACCACCTG CTGACCGACG TCTGGACGTC GGCGGGGGTA
ATCGCCGGCG TCGCGCTCGT CTGGTTCACT GGCTGGCTGT GGCTGGACCC GGTCATCGCG
CTGCTCGTCG CCTTGAACAT CGTCTGGACC GGATGGCAGT TGCTGCAGCG CTCGGCCTCC
GGACTCATGG ACGTCTCGCT ACCCGAGGCC GACCTGCGCG CCATCGAAAC CATCCTCGAT
GGCTACCGCC GCCACGGCCT GGACTTTCAC GCGCTGCGCA CGCGCCAGGC CGGTGCCCGC
GCCTTCGTCA GTGTGCATCT GCTGGTGCCG GGAGCGTGGA CCGTCCAGCA GGGCCACGAC
TGGTCGGAGC GCGTGGAGTC CGACATCCGG CGCGCGGTCA GCCAGGTCCA CATCACGACC
CATCTCGAGC CCCTCGAGGA TCCGCTGTCG CTGGCCGACT CCGGCCTCGA CCGCCACGAC
GAGGGAAGGC GGGAATGA
 
Protein sequence
MHASLKRYAW LSIAAAVATI LLKGSAWWLT GSVGLLSDAL ESFVNLAGAM MALAMLSLAA 
QPADDNHAHG HGKAEYFSSA FEGFLILVAA MSIGYAAVER LLNPQPLETV GIGLAISVIA
SIINLVTSRV LLGVGRKYKS ITLEADAHHL LTDVWTSAGV IAGVALVWFT GWLWLDPVIA
LLVALNIVWT GWQLLQRSAS GLMDVSLPEA DLRAIETILD GYRRHGLDFH ALRTRQAGAR
AFVSVHLLVP GAWTVQQGHD WSERVESDIR RAVSQVHITT HLEPLEDPLS LADSGLDRHD
EGRRE