Gene Tbd_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1109 
Symbol 
ID3673180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1166790 
End bp1167998 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content66% 
IMG OID637709792 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_314867 
Protein GI74317127 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.165958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATC AACTGCTGGT TCATCAGGTG CGGCGGCGTG TCGAATCGTC GGAGTTGCCG 
CTCTCGGTCG AATTCTGGGA TGGTCAGAAA GTCGGGCGCA CCCCCGCTGC GGTGCGTGTG
CGCCTGCGCG AGGCGCGGAG CCTCAGGGCG ATCGCGAATC CCAGCCTCGG TGCGCTCGCC
CGCGCCTACG TCGAAGGCCA GCTCGATCTC GAAGGCGACG TGCACGACAT CCTGGCGCTC
GGCGATCGCC TGTGCAGCGC GGGCGACCAT AAAGCGGAAA GCGGTGTCGA GCGCTGGAAG
TGGTGGCGGC ACACGCGCAG CCGCGACCGC AGGAACATCC AGTACCACTA CGACGTTTCC
AACGACTTTT ACGGCCTCTG GCTCGATGCG CGCCGCGTCT ATTCCTGCGC GTATTTCCGC
TCGCCCGACA TGGATCTCGA TGCGGCGCAG GAGGCCAAGC TCGAGCATAT CTGCCGCAAG
CTCGACCTCC GGCCCGGCGA GCGTTTTCTC GACATCGGCT GCGGCTGGGG CGGCCTGCTC
CTGCATGCGG CCGAACGTCA CGGCGTCCAG GGCGTCGGTA TCACCTTGTC GGACGACCAG
CATCGGCACG TCAGCGACCT CATCGCCCGC AGCGGTCTGG CCGACCGGGT GGAAGTACGC
AAAATGGATT ACCGCGATGT TCCCGAGCAC GGGGGGTACG ACAAGATCGC CAGCGTCGGA
ATGTTCGAGC ACGTGGGGCG GGTGAACCTC GTCACCTATT TCGACAAGAT CAATGCATTG
CTGCGCCCCG GCGGTCTTGT TCTCAACCAC GGCATCACGG CGGCGGCGCC GGGCTCGGCC
GGACTCGGCA GCGGAATCGC AGAATTCATC AACGACTACG TCTTCCCCGG GGGCGAGCTC
GTGCACGTGT CGGACGTCTT CCGCGCCGCC GCCGACAGCG GCCTCGAATG CCTCGACGCC
GAGAATCTGC GGCCGCACTA CGGCAAGACG CTGTGGCACT GGGTGAACCG TCTCGAGCAG
CACGCCGACG TGGCGCGCCG TCTGATCGGC GAGCAGAAAT ACCGCATCTG GCGCATCTAC
ATGGCCGGCT CGGCCCACGC CTTCGAATGC GGGTGGATGG AGTTGTGGCA GCTCCTCGCC
GGCAAGGCCG AGCGCGGGAG CCAGCCGAAT TACCCGTTCA CGCGGGACTT CATGTACGGC
ACCCGCTGA
 
Protein sequence
MLDQLLVHQV RRRVESSELP LSVEFWDGQK VGRTPAAVRV RLREARSLRA IANPSLGALA 
RAYVEGQLDL EGDVHDILAL GDRLCSAGDH KAESGVERWK WWRHTRSRDR RNIQYHYDVS
NDFYGLWLDA RRVYSCAYFR SPDMDLDAAQ EAKLEHICRK LDLRPGERFL DIGCGWGGLL
LHAAERHGVQ GVGITLSDDQ HRHVSDLIAR SGLADRVEVR KMDYRDVPEH GGYDKIASVG
MFEHVGRVNL VTYFDKINAL LRPGGLVLNH GITAAAPGSA GLGSGIAEFI NDYVFPGGEL
VHVSDVFRAA ADSGLECLDA ENLRPHYGKT LWHWVNRLEQ HADVARRLIG EQKYRIWRIY
MAGSAHAFEC GWMELWQLLA GKAERGSQPN YPFTRDFMYG TR